DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and Paris

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:Paris / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:255 Identity:81/255 - (31%)
Similarity:121/255 - (47%) Gaps:29/255 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 DPALNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEK 308
            |...:..:..|:|..|...:...|...:|:|:|:..:.|.|..|::.|....:|..|::.|:..|
  Fly   116 DGKSDSKKVAFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPYCKRNFRLRVTLKAHMKTHNAAK 180

  Fly   309 PYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECE 373
            ||:|..|.|.|.|.|:|..|.|:|:..:|.:|.||.|.||..|.|..|.:||          ..|
  Fly   181 PYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTH----------GSE 235

  Fly   374 REFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSL 438
            |.||                   |:.|.:.|.....|..|.::|.||:||.||.|.::|.....|
  Fly   236 RPFK-------------------CSKCTKTFTRKFHLDNHFRSHTGERPFKCSHCPKAFAMKQHL 281

  Fly   439 NIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHI 498
            ..|.|:|..::||:|..|.|.|..:|:|..|..:|..|:.:.||.|...|.|:..|.:||
  Fly   282 KQHSRLHLPDRPFRCSHCPKTFRLSSTLKEHKLVHNAERTFKCPHCASFYKQRKTLARHI 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 80/254 (31%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
zf-H2C2_2 296..321 CDD:463886 10/24 (42%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 9/19 (47%)
C2H2 Zn finger 369..389 CDD:275368 4/19 (21%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:463886 11/24 (46%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:463886 10/24 (42%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..501 CDD:275368 8/18 (44%)
ParisNP_608840.1 zf-AD 4..78 CDD:462262
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 5/19 (26%)
COG5048 <180..341 CDD:227381 64/189 (34%)
C2H2 Zn finger 184..204 CDD:275368 9/19 (47%)
C2H2 Zn finger 212..232 CDD:275368 9/19 (47%)
C2H2 Zn finger 240..260 CDD:275368 5/19 (26%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..341 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.

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