DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and CG44002

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:258 Identity:74/258 - (28%)
Similarity:107/258 - (41%) Gaps:59/258 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 CTHCEASFPNAGDLSKHV-RSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAF 319
            ||.|..||...|.|..|: |.|.|:.|...|                  .:.|...|.||..|| 
  Fly   146 CTQCHMSFRRPGLLELHILRHHTTDGPRPMS------------------STSEHAVKEELRTKA- 191

  Fly   320 TQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDE 384
                      |..|....|.|..|:|.|.:.:|.:.||||                         
  Fly   192 ----------RQLSRNSTHTCRLCNKTFCSKASCVRHQKT------------------------- 221

  Fly   385 HMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEK 449
                ||.|..:.|.||::.|...:.:.:|::.|.||:||.|..|..:|:...:|..|:||||||:
  Fly   222 ----HTGEKPFACEICQKPFADLASVKRHLRTHTGERPFKCLTCQSAFSDGSALRQHIRIHTGER 282

  Fly   450 PFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTS 512
            |::|.:|||.|.:.|....||..|..||.:.|..|.:.:.|...|.:|::........:|:.|
  Fly   283 PYKCDMCDKFFRERSDARKHMMSHTAEKRFKCSQCERRFRQPKGLRRHVKLCHTDKVENAAIS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 72/245 (29%)
C2H2 Zn finger 256..276 CDD:275368 9/20 (45%)
C2H2 Zn finger 284..304 CDD:275368 1/19 (5%)
zf-H2C2_2 296..321 CDD:463886 6/24 (25%)
C2H2 Zn finger 312..332 CDD:275368 5/19 (26%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 0/19 (0%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:463886 9/24 (38%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..462 CDD:463886 14/24 (58%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
C2H2 Zn finger 481..501 CDD:275368 5/19 (26%)
CG44002NP_608754.1 zf-AD 4..74 CDD:462262
C2H2 Zn finger 146..166 CDD:275368 8/19 (42%)
COG5048 <162..302 CDD:227381 55/197 (28%)
C2H2 Zn finger 202..222 CDD:275368 9/48 (19%)
C2H2 Zn finger 230..250 CDD:275368 5/19 (26%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
SUF4-like 282..>342 CDD:411020 17/59 (29%)
C2H2 Zn finger 286..311 CDD:411020 10/24 (42%)
C2H2 Zn finger 286..306 CDD:275368 8/19 (42%)
C2H2 Zn finger 314..335 CDD:411020 5/20 (25%)
C2H2 Zn finger 314..333 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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