DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and CG2202

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster


Alignment Length:586 Identity:152/586 - (25%)
Similarity:220/586 - (37%) Gaps:187/586 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 ELAEDGSDSSDGSASSGSDSSSSSDDDDDDDDDDSSSSSSSSSNSSSSSSSVPTTSNSNTQQSQE 165
            ||.....:..||.|    |..|..||||||||::.:.....                        
  Fly   401 ELPLSDEERFDGFA----DDDSDLDDDDDDDDEEDAGDDDD------------------------ 437

  Fly   166 SVQPLHGLVAGPGYNEFQLQMTDPRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKR 230
                          .||:|:. :|.:.                                ..|:|:
  Fly   438 --------------GEFRLKQ-EPLDG--------------------------------EKPLKK 455

  Fly   231 ----RRGRRSNIGAPVMDPALNGNQKCF-------------------QCTHCEASFPNAGDLSKH 272
                ||.||.|...|..|......|:.|                   .|.||..:|..:..|..|
  Fly   456 AKSGRRRRRRNKDEPNPDNRCEVCQRTFSRHCHLLRHKLSHLEKKPHNCPHCPKAFARSDHLKAH 520

  Fly   273 VRSHITNKPFQCSICQKTFTHIGSLNTH-IRIHSGE--KP----------YKCELCPKAFTQSSS 324
            |:|..:||..:||:|:..|:.:.:|..| :..|:||  :|          :.||.|.|.|:..:.
  Fly   521 VQSLHSNKEHKCSLCEAAFSRLDALERHKVSKHNGEGLEPGSELKLQLAEHTCEYCSKRFSSKTY 585

  Fly   325 LMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMH 389
            |..|...|: ...:.|..||:.|...:.|..|:|||.. ...|:|..|...|.....|..|||.|
  Fly   586 LRKHTLLHT-DFLYACKTCDETFRERAQLREHEKTHTG-QRNFLCCICGDSFARNDYLRVHMRRH 648

  Fly   390 TQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCK 454
            ..|..|:|..|.:||..:::|..|.:.|.|.||..|:.|.:||.::.:|.||||.||||:|::|.
  Fly   649 NGEKPYKCRFCVKAFPRATDLKVHERYHTGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCD 713

  Fly   455 LCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAY---------LNKHI------------ 498
            .|.|.|||::.|..|::.|.||: |.||.| .:|..|.|         .||||            
  Fly   714 QCPKSFTQSNDLKAHIRRHTGER-YKCPHC-DAYFLQLYNMRNHCMSAHNKHIETKTGRLQRTGL 776

  Fly   499 -----QAH-----------------QMASAASASTSPGLLVAKQPHETLVCIVCGSLHADATALA 541
                 |:|                 |:|:.|:|:.:.|   |:....|.|....|:.:|.|.|.|
  Fly   777 LDDGGQSHLTTVVMPPARYPNELDPQLAATAAATAAGG---AESTSSTTVIHSPGTYNATAAAPA 838

  Fly   542 SHVHSQHAALLDTMKQSGMNT-APGGAI---PDVKCSAEEQQAYVERVQCVLQQMNHQQQHQQHQ 602
            :.....:      ...:.:|| ||.||.   |.|                :...|.:|....||.
  Fly   839 NTFDGAN------FTPTAVNTPAPFGAFNFPPAV----------------MAHLMYNQGGSSQHS 881

  Fly   603 Q 603
            |
  Fly   882 Q 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 97/313 (31%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
C2H2 Zn finger 284..304 CDD:275368 6/20 (30%)
zf-H2C2_2 296..321 CDD:463886 11/37 (30%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:463886 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..462 CDD:463886 14/24 (58%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
C2H2 Zn finger 481..501 CDD:275368 11/45 (24%)
CG2202NP_572657.2 zf-AD 45..121 CDD:214871
C2H2 Zn finger 150..171 CDD:275368
C2H2 Zn finger 192..213 CDD:275370
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381 92/321 (29%)
C2H2 Zn finger 476..496 CDD:275368 2/19 (11%)
C2H2 Zn finger 504..525 CDD:275368 8/20 (40%)
C2H2 Zn finger 532..548 CDD:275368 5/15 (33%)
C2H2 Zn finger 573..593 CDD:275368 7/19 (37%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
C2H2 Zn finger 628..648 CDD:275368 7/19 (37%)
C2H2 Zn finger 656..676 CDD:275368 6/19 (32%)
C2H2 Zn finger 684..704 CDD:275368 9/19 (47%)
C2H2 Zn finger 712..732 CDD:275368 8/19 (42%)
C2H2 Zn finger 739..755 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.

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