DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and CG2120

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster


Alignment Length:223 Identity:68/223 - (30%)
Similarity:101/223 - (45%) Gaps:15/223 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 CTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFT 320
            |..|:..|..|.:|..|..:|...||..|..|.|.|..:..|..|...|:.|:|:||::|.|.|.
  Fly   101 CDICDRRFSEAYNLRIHKMTHTDEKPHVCVECGKGFRQLNKLRIHAVTHTAERPHKCDICGKGFR 165

  Fly   321 QSSSLMVHMRSHSVRKPHQCV--QCDKGFINYSSLLLHQK-THIAPTETFICPECEREFKAEALL 382
            .::.|.||.|.|:..||:.|:  .|...|.:..:..:|.| .|.|.|:    |:.|..      |
  Fly   166 YANYLTVHRRLHTGEKPYPCLATDCHLSFHSIHARRIHTKLRHAAQTD----PDPEHP------L 220

  Fly   383 DEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSL--CDRSFTQSGSLNIHMRIH 445
            .|..:..|..|.:.|.:|.........|..|:|.|..::.|.|..  |.:.|..:..|..|...|
  Fly   221 AEQEQRDTSALSFTCPVCSRVLTDQCYLSIHLKRHYNQRDFPCPQPECGKRFFSASELKHHQIAH 285

  Fly   446 TGEKPFQCKLCDKCFTQASSLSVHMKIH 473
            |.::||.|.||...|.:.|:...|:|:|
  Fly   286 TQQRPFACPLCPARFLRKSNHKQHLKVH 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 68/223 (30%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 6/19 (32%)
zf-H2C2_2 296..321 CDD:463886 10/24 (42%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 5/22 (23%)
C2H2 Zn finger 369..389 CDD:275368 4/19 (21%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:463886 8/26 (31%)
C2H2 Zn finger 425..445 CDD:275368 5/21 (24%)
zf-H2C2_2 437..462 CDD:463886 10/24 (42%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..501 CDD:275368
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 6/19 (32%)
C2H2 Zn finger 129..149 CDD:275368 6/19 (32%)
COG5048 151..>264 CDD:227381 35/122 (29%)
C2H2 Zn finger 157..177 CDD:275368 8/19 (42%)
C2H2 Zn finger 185..206 CDD:275368 4/20 (20%)
C2H2 Zn finger 235..255 CDD:275368 5/19 (26%)
C2H2 Zn finger 263..285 CDD:275368 5/21 (24%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.