DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and CG32772

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_572196.3 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster


Alignment Length:567 Identity:152/567 - (26%)
Similarity:233/567 - (41%) Gaps:115/567 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 PVC----ELAEDGSDSSDGSASSGSDSSSSSDDDDDDDDDDSSSSSSSSSNSSSSSSSVPTTSNS 158
            |.|    |...:.|:....:|::.:.::|:|        ...::|:::::.|||::||..:.:.:
  Fly    23 PTCVRCSEQLTNNSNFHQSAAAAAAVAASAS--------AAVAASAAAAATSSSTASSSDSDAIA 79

  Fly   159 NTQQSQESVQPLHGLVAGPGYNEFQLQMTDPRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGL 223
            ..||.|...|..|       .|..|.|....:..:|                       |....|
  Fly    80 QQQQHQNPQQQQH-------QNSQQQQQQQQQMQSS-----------------------SSSENL 114

  Fly   224 QSTPIKRRRGRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQ 288
            ||.....             |..|..|:: ..|..|..:|.....|..|:|:|...:.|.|:.|.
  Fly   115 QSQDDSE-------------DVDLIFNEE-GSCPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCH 165

  Fly   289 KTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQC--VQCDKGFINYS 351
            |.||...:|..|.|||:.::||:|..|.|.|||.::|..|.|.|:..:|..|  .:|.:.|...:
  Fly   166 KGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTGERPFVCNEPECGRSFAQVT 230

  Fly   352 SLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREA-FRASSELVQHMK 415
            :|..|.|:| ...:.:.|..|.::|.....|::|::.|.....|.|..|.|. |:..|:|..|||
  Fly   231 NLNNHMKSH-HKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPEKNFKLQSQLHTHMK 294

  Fly   416 NHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYP 480
            .|....|:.|..||..|.|...|:.|:::| .|..|:|.:|...|.|.|.|..|::.|...:...
  Fly   295 THGLAFPYECDKCDEKFLQQAHLDQHLKMH-DEFKFKCDICPSSFNQESLLKKHVQRHVEGRYLS 358

  Fly   481 CPI--CGKSYSQQAYLNKHI---QAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHA----- 535
            ||:  |.:|::.:.:|:||:   .||........|...|.|...|....::.......|.     
  Fly   359 CPVANCAESFAVRQHLSKHLLTNHAHHELPPPKRSKKAGTLQTSQQPLAMIGQPLSLQHTTGQRG 423

  Fly   536 -------DATALAS---------HVHSQHAALLDTMKQSGMNTAPGGAIPDVKCSAEEQQAYVER 584
                   .||.||:         .:||||                   |.:|...:.:||     
  Fly   424 RPPKNKNKATTLAATAIKIEINESLHSQH-------------------ISNVSGLSIQQQ----- 464

  Fly   585 VQCVLQQMNHQQQHQQHQQQPPQQQQQHPQQQQQQHLQQQPHQMQLP 631
               :.|.|..|...||.|||..|||||...|||||..||| ..:.||
  Fly   465 ---INQHMQQQAAQQQAQQQAAQQQQQQAAQQQQQAAQQQ-QLLHLP 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 83/263 (32%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:463886 11/24 (46%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 6/21 (29%)
C2H2 Zn finger 369..389 CDD:275368 5/19 (26%)
C2H2 Zn finger 397..417 CDD:275368 9/20 (45%)
zf-H2C2_2 409..434 CDD:463886 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:463886 8/24 (33%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..501 CDD:275368 7/24 (29%)
CG32772NP_572196.3 C2H2 Zn finger 133..153 CDD:275368 6/19 (32%)
C2H2 Zn finger 161..181 CDD:275368 8/19 (42%)
zf-H2C2_2 173..198 CDD:463886 11/24 (46%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
C2H2 Zn finger 217..239 CDD:275368 6/21 (29%)
SUF4-like 222..>267 CDD:411020 11/45 (24%)
C2H2 Zn finger 222..240 CDD:411020 6/18 (33%)
C2H2 Zn finger 247..267 CDD:411020 5/19 (26%)
C2H2 Zn finger 247..267 CDD:275368 5/19 (26%)
C2H2 Zn finger 275..296 CDD:275368 9/20 (45%)
C2H2 Zn finger 304..324 CDD:275368 7/19 (37%)
C2H2 Zn finger 331..351 CDD:275368 7/19 (37%)
C2H2 Zn finger 359..380 CDD:275368 7/20 (35%)

Return to query results.
Submit another query.