DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and Zbtb43

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001012094.1 Gene:Zbtb43 / 311872 RGDID:1310287 Length:503 Species:Rattus norvegicus


Alignment Length:348 Identity:82/348 - (23%)
Similarity:130/348 - (37%) Gaps:85/348 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 RRSNIGAPVMDPA---LNGNQKCFQC-THCEASFPNAGDL----------SKHVRSHITNKPFQC 284
            ::.|.|:....|:   .||..:.|:. :.....||.|.:|          ...:.|.:|...:  
  Rat   168 QKLNHGSDHQSPSSSNYNGLAESFELGSGGHTDFPKAQELRDGENEEESTKDELSSQVTEHEY-- 230

  Fly   285 SICQKTFTHIGSLNTHIRIHSGEK--------PYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCV 341
             :...:.|....|:|.:....||:        .|...|..|     .|:|.|.|...| ||.:..
  Rat   231 -LPSNSSTEHDRLSTEMASQDGEEGTNDSTEFHYTRPLYSK-----PSIMPHRRWIHV-KPERLE 288

  Fly   342 QCDKGFINYSSLLLHQ---KTHIAPTETFICPE-CEREF-----KAEALLDEH------------ 385
            |...|...:::...||   ..:...|:....|. .|.||     |.|...|||            
  Rat   289 QPWDGMDVHAAYDEHQVSESVNTMQTDHSAQPSGAEEEFQIVEKKVEVEFDEHAEGSNYDEQVDF 353

  Fly   386 ----------------MRMHTQELVYQCAICREAFRASSELVQHMK---NHMG----EKPFTCSL 427
                            :..|.||.....     .:..:.|:|..:|   :|:|    :|.:.|. 
  Rat   354 YGSSMEEFSGEKLGGGLIGHKQETALAA-----GYSENIEMVMGIKEEASHLGFSATDKLYPCQ- 412

  Fly   428 CDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQA 492
            |.:|||.....:.||.:|.|.:|:.|.:|.|.|.....|..|||||.|.|||.|.||.|.:..:.
  Rat   413 CGKSFTHKSQRDRHMSMHLGLRPYGCSVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRD 477

  Fly   493 YLNKHI----QAHQMASAASAST 511
            ..::|:    ::::.|.|...:|
  Rat   478 SFHRHVTSCTKSYEAAKAGQNTT 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 41/214 (19%)
C2H2 Zn finger 256..276 CDD:275368 4/30 (13%)
zf-H2C2_2 268..293 CDD:290200 3/34 (9%)
C2H2 Zn finger 284..304 CDD:275368 3/19 (16%)
zf-H2C2_2 296..321 CDD:290200 7/32 (22%)
zf-C2H2_2 312..>387 CDD:289522 23/111 (21%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 4/22 (18%)
C2H2 Zn finger 369..389 CDD:275368 9/53 (17%)
C2H2 Zn finger 397..417 CDD:275368 3/22 (14%)
zf-H2C2_2 409..434 CDD:290200 10/31 (32%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:290200 9/24 (38%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
zf-H2C2_2 465..490 CDD:290200 14/24 (58%)
C2H2 Zn finger 481..501 CDD:275368 5/23 (22%)
Zbtb43NP_001012094.1 BTB_POZ_ZBTB43 44..164 CDD:349536
C2H2 Zn finger 412..430 CDD:275368 6/18 (33%)
C2H2 Zn finger 438..458 CDD:275368 8/19 (42%)
zf-H2C2_2 450..473 CDD:404364 14/22 (64%)
C2H2 Zn finger 466..483 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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