DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and CG11398

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster


Alignment Length:302 Identity:71/302 - (23%)
Similarity:120/302 - (39%) Gaps:42/302 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 LNTHIRIHSGEKP-YKCELCPKAFTQSSSLMVHMRSHSVR-------KPHQCVQCDKGFINYSSL 353
            ||...:...|..| :.|..||..|.....|..|..:|..:       ..|.|..|.:.|..:::|
  Fly    36 LNERSQHQQGGSPSFVCRRCPALFLTREELAAHRPTHRYQGGQQTPASEHACDACGRVFQKHNAL 100

  Fly   354 LLHQKTHIAPTETFICPECEREFKAEALLDEHMR-MHTQELVYQCAI--CREAFRASSELVQHMK 415
            :.|...| .....:.||||...|...:..:.|:: :|.:..::.|..  |::.|:...|..||:|
  Fly   101 VDHMNAH-NDVRNYPCPECPARFVQRSNRECHLKNVHRKVYLHSCPEPGCKKRFQQRRECDQHVK 164

  Fly   416 N-HMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPY 479
            . |..|:...|..|...|:...:...|:..|...|.:.|.:|.|.|.:..:..||:.:|:..|.|
  Fly   165 TVHQNERNLVCDTCSARFSHPVNYRKHLASHGSAKSYGCPICGKLFGRPENRDVHLFVHSICKAY 229

  Fly   480 PCPICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHADATALASHV 544
            .|.:||..|.::..|.:|      ..|:.....|  :|.::|.             .:.|||:..
  Fly   230 ICSVCGADYMRRNQLIRH------GLASGHHNDP--IVRQKPQ-------------FSPALAAKN 273

  Fly   545 HSQHAALLDTMKQSGMNTAPGGAIPDVKCSAEEQQAYVERVQ 586
            .||.:| :|..:...:....|       ..|.:...|:|..|
  Fly   274 RSQRSA-IDESQDEELQWLKG-------VDALDSAGYLENSQ 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 55/215 (26%)
C2H2 Zn finger 256..276 CDD:275368
C2H2 Zn finger 284..304 CDD:275368 2/6 (33%)
zf-H2C2_2 296..321 CDD:463886 8/24 (33%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 5/19 (26%)
C2H2 Zn finger 369..389 CDD:275368 6/20 (30%)
C2H2 Zn finger 397..417 CDD:275368 7/22 (32%)
zf-H2C2_2 409..434 CDD:463886 9/25 (36%)
C2H2 Zn finger 425..445 CDD:275368 4/19 (21%)
zf-H2C2_2 437..462 CDD:463886 7/24 (29%)
C2H2 Zn finger 453..473 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 6/19 (32%)
C2H2 Zn finger 87..107 CDD:275368 5/19 (26%)
C2H2 Zn finger 115..136 CDD:275368 6/20 (30%)
C2H2 Zn finger 144..165 CDD:275368 6/20 (30%)
C2H2 Zn finger 175..195 CDD:275368 4/19 (21%)
C2H2 Zn finger 203..223 CDD:275368 6/19 (32%)
C2H2 Zn finger 231..247 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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