DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and Opbp

DIOPT Version :10

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster


Alignment Length:555 Identity:129/555 - (23%)
Similarity:194/555 - (34%) Gaps:144/555 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 SSSSSSVPTTSN-----------------------SNTQQSQESVQPLHGLVAG-----PGYNEF 182
            |||:.:..||.|                       .|..:..||....||..||     .|..:|
  Fly     2 SSSNQAEETTPNLHVEDGDLSGGALQQEFLYCESCGNVYEDTESYDRAHGPQAGCCTGASGELDF 66

  Fly   183 QLQMTDPRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPAL 247
            ..::.:...|..:.......:..||.:|:...|                    :|:.|. .|...
  Fly    67 IEEVAEDCISEEVGEEDIVYADVPLWELVEEVP--------------------ANVKAE-KDQNE 110

  Fly   248 NGNQKCFQCTHCEASFPNA--------------------GDLSKHVRSHI-----------TNKP 281
            ..|...:.|..|.:.|.|.                    ||....||..:           .:..
  Fly   111 PSNSDRYFCYDCHSIFENRNKAEEHICPRAESGGSSQQDGDAKAPVRRKLASVSARTGPRDASSV 175

  Fly   282 FQCSICQKTFTHIGSLNTHIRIHSGEKP--------------------YKCELCPKAFTQSSSLM 326
            ..|.||...|:....|..|:|||....|                    :.||:|.|:|.: :.|.
  Fly   176 ISCGICNTVFSSEKFLKFHMRIHENRAPKSIQDALPIGAHQQYSELDQFYCEICNKSFDE-TLLT 239

  Fly   327 VHMRSHSVRKPH-QCVQCDKGFINYSSLLLHQKTHIAPTET------------------FICPEC 372
            ||.:.|...... .|..|::.|.|..:..:|||.|..|.::                  |.|..|
  Fly   240 VHKQMHQQESSEIMCSICNRKFENEVTYQMHQKIHEKPRDSESSRKLAQRTSLDKEKPGFPCQYC 304

  Fly   373 EREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGS 437
            ||.|.......:|.|:||.|..|.|.:|.:.||.|..|..|::.|...:|:.|::|::.|.....
  Fly   305 ERVFTRPFEKVKHERVHTGEKPYACEVCGKTFRVSYSLTLHLRTHTNIRPYVCTVCNKRFKSHQV 369

  Fly   438 LNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQ 502
            .:.|:|||:.|:.|.|..|.|.|..:..|..|...|.  |||.|.:|.:.:|....:..|:|.|:
  Fly   370 YSHHLRIHSSERQFSCDACPKTFRTSVQLYAHKNTHT--KPYRCAVCNRPFSSMYAVKNHMQTHK 432

  Fly   503 MASA-----------ASASTSPGLLVAKQPHETLVCIVCGSLHADATALASHVHSQHAALLDTMK 556
            ..|:           .||:||......|     ..|..||:.:|...||..|:.|.|..:.:...
  Fly   433 EISSKGSVGSGTPNIKSAATSKSQAAGK-----FYCNTCGAEYARLFALRLHMKSAHGLVEEQEN 492

  Fly   557 QSGMNTAPGGAIPD------VKCSAEEQQAYVERV 585
            .:....|...|..|      :..:||...||:..|
  Fly   493 PATSTDAAHVAETDDSETAVLIAAAEADAAYINAV 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 82/325 (25%)
C2H2 Zn finger 256..276 CDD:275368 8/39 (21%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
zf-H2C2_2 296..321 CDD:463886 11/44 (25%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
zf-H2C2_2 409..434 CDD:463886 7/24 (29%)
C2H2 Zn finger 425..445 CDD:275368 5/19 (26%)
zf-H2C2_2 437..462 CDD:463886 10/24 (42%)
C2H2 Zn finger 453..473 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368 5/19 (26%)
OpbpNP_724479.1 COG5048 <185..433 CDD:227381 71/250 (28%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
SFP1 <323..373 CDD:227516 14/49 (29%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 357..377 CDD:275368 5/19 (26%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
C2H2 Zn finger 411..431 CDD:275368 5/19 (26%)

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