DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and Zfp26

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_011240753.1 Gene:Zfp26 / 22688 MGIID:99173 Length:965 Species:Mus musculus


Alignment Length:343 Identity:123/343 - (35%)
Similarity:183/343 - (53%) Gaps:47/343 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 LNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYK 311
            ::..:|.|:|..|..:..::..|..|:|:|...|||:|:.|.||||....|..|:|.|:|||||:
Mouse   623 IHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTGEKPYE 687

  Fly   312 CELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREF 376
            |:.|.|.|.:.|.|..|:|:|:..:|::|.:|.||||:::.|.:|.||| :....|.|..|.:.|
Mouse   688 CKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTH-SSERPFQCKVCTKSF 751

  Fly   377 KAEALLDEHMRMHTQELVYQCAICREAFRA----------------------------SSELVQH 413
            :..:.|:.|.|:||....|:|:.|.:||.|                            ||.|:.|
Mouse   752 RNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSYACQECGKAFSTSSGLIAH 816

  Fly   414 MKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKP 478
            :::|.|||||.|..|.::|..|..||:|::||||||||||.:|.|.||.:|.|.|||:.|.||||
Mouse   817 IRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKP 881

  Fly   479 YPCPICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHADATALASH 543
            :.|.|||||:...:||..|::.|               ..::|:   ||..||....:.:.|..|
Mouse   882 FQCIICGKSFLWSSYLRVHMRIH---------------TGEKPY---VCQYCGKAFTEHSGLNKH 928

  Fly   544 VHSQHAALLDTMKQSGMN 561
            :...........|:.|.|
Mouse   929 LRKHTGEKPYEYKECGEN 946

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 64/186 (34%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
zf-H2C2_2 268..293 CDD:290200 12/24 (50%)
C2H2 Zn finger 284..304 CDD:275368 9/19 (47%)
zf-H2C2_2 296..321 CDD:290200 13/24 (54%)
zf-C2H2_2 312..>387 CDD:289522 27/74 (36%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 9/19 (47%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 9/47 (19%)
zf-H2C2_2 409..434 CDD:290200 11/24 (46%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:290200 16/24 (67%)
C2H2 Zn finger 453..473 CDD:275368 10/19 (53%)
zf-H2C2_2 465..490 CDD:290200 15/24 (63%)
C2H2 Zn finger 481..501 CDD:275368 9/19 (47%)
Zfp26XP_011240753.1 KRAB 113..171 CDD:214630
C2H2 Zn finger 297..317 CDD:275368
COG5048 325..760 CDD:227381 52/137 (38%)
C2H2 Zn finger 352..372 CDD:275368
C2H2 Zn finger 380..400 CDD:275368
C2H2 Zn finger 408..428 CDD:275368
C2H2 Zn finger 436..456 CDD:275368
C2H2 Zn finger 464..484 CDD:275368
C2H2 Zn finger 492..512 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 548..568 CDD:275368
C2H2 Zn finger 576..596 CDD:275368
COG5048 600..956 CDD:227381 123/343 (36%)