DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and znf-782

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:618 Identity:154/618 - (24%)
Similarity:225/618 - (36%) Gaps:195/618 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TLHPHEPG----------NGQQEQESPGDESEDYSWIFEPVCELAEDGSDSSDGSASSGSDSSSS 123
            ||..|:|.          :.:..:|...:|.||         ||.|:                  
 Worm     2 TLDYHQPTTTNTTLPDDIHMKDPEEEEFEEYED---------ELLEE------------------ 39

  Fly   124 SDDDDDDDDDDSSSSSSSSSNSSSSSSSVPTTSNSNTQQSQESVQPLHGLVAGPGYNEFQLQMTD 188
             :::.|::.::..:|.|:||..|:.|....::||.:           ||                
 Worm    40 -EEEFDEELEELENSDSASSLVSAGSPHGSSSSNGS-----------HG---------------- 76

  Fly   189 PRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPALNGNQKC 253
                                 ..||....||..|..|:            |:|...|     :|.
 Worm    77 ---------------------SSPPLQVQSPSQGSGSS------------GSPTGQP-----EKR 103

  Fly   254 FQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKA 318
            ..||.|...|.....|..|.|||...||:.|..|||||....:|..|.|.|:||:||||..|.|.
 Worm   104 HICTVCGKGFSYFSILESHKRSHTGEKPYNCHFCQKTFAQKATLQVHERTHTGERPYKCRYCEKT 168

  Fly   319 FTQSSSLMVHMRS-HSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALL 382
            |.|..:..||.:| |...:.::|.:|||...:.|:|..|:|||  ..:||.|..|.:.|..:..|
 Worm   169 FAQYGTKTVHEKSAHLGIRNYKCPKCDKLLSSPSALYTHKKTH--GDKTFRCDFCPKTFALKNYL 231

  Fly   383 DEHMR-MHTQ-ELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIH 445
            ..|:: :|.| |..:.|..|.:.|..:..|..|::.|.||:|:.|..|.::|...|:|..|.|.|
 Worm   232 KLHVKQVHEQNERKHVCVYCNKGFAYAGSLQVHVRTHTGERPYVCKFCPKAFASQGNLQSHERTH 296

  Fly   446 TGEKPFQCKLCDKCFTQ------------------------------------------------ 462
            |||:|:.|:.|.:.|.|                                                
 Worm   297 TGERPYSCQFCQRTFIQKSQLTAHESTHLTQKHSVNPDSTTADILPVAGSVTDHQMVGNYECTFC 361

  Fly   463 ------ASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQP 521
                  ||||.:||:.|..:..|.|..|||.|||:..||.|....:.......:|.     ::..
 Worm   362 NKKYPYASSLYIHMRKHTEKSAYSCDGCGKPYSQKISLNIHQDQCEAFKNRLKTTD-----SQFS 421

  Fly   522 HETLVCIVCGSLHADATALASHVHS----QHAALLDTMKQSGMNTAPGGAIPDVKCSAEEQQAYV 582
            |.   |..||.......||..||.|    ::.|.|...:|...|            ...:.::..
 Worm   422 HN---CDGCGKSFVQRIALQIHVDSCEPHKNLARLKLSQQQNQN------------QNSDSESDT 471

  Fly   583 ERVQCVLQQ--MNHQQQHQQ-------HQQQPP 606
            |...|.|..  :.....|||       :.||||
 Worm   472 EMKICPLPNPPLTLAPTHQQIPPPVNIYAQQPP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 59/161 (37%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
zf-H2C2_2 268..293 CDD:290200 13/24 (54%)
C2H2 Zn finger 284..304 CDD:275368 9/19 (47%)
zf-H2C2_2 296..321 CDD:290200 13/24 (54%)
zf-C2H2_2 312..>387 CDD:289522 26/75 (35%)
C2H2 Zn finger 312..332 CDD:275368 8/20 (40%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 5/20 (25%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:290200 9/24 (38%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:290200 11/24 (46%)
C2H2 Zn finger 453..473 CDD:275368 10/73 (14%)
zf-H2C2_2 465..490 CDD:290200 11/24 (46%)
C2H2 Zn finger 481..501 CDD:275368 10/19 (53%)
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 7/19 (37%)
zf-H2C2_2 119..143 CDD:290200 13/23 (57%)
C2H2 Zn finger 134..154 CDD:275368 9/19 (47%)
zf-H2C2_2 147..171 CDD:290200 13/23 (57%)
C2H2 Zn finger 162..180 CDD:275368 7/17 (41%)
COG5048 <187..404 CDD:227381 63/218 (29%)
C2H2 Zn finger 191..211 CDD:275370 8/19 (42%)
C2H2 Zn finger 218..239 CDD:275368 5/20 (25%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
zf-H2C2_2 260..285 CDD:290200 9/24 (38%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
zf-H2C2_2 288..313 CDD:290200 11/24 (46%)
C2H2 Zn finger 304..324 CDD:275368 4/19 (21%)
C2H2 Zn finger 386..403 CDD:275368 9/16 (56%)
C2H2 Zn finger 424..441 CDD:275368 5/16 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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