DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and Y37E11B.1

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001023441.1 Gene:Y37E11B.1 / 177118 WormBaseID:WBGene00021374 Length:167 Species:Caenorhabditis elegans


Alignment Length:169 Identity:48/169 - (28%)
Similarity:69/169 - (40%) Gaps:30/169 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 KCELCPKAFTQSSSLMVHMRSH-SVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECER 374
            :||:|.:......||..|.|.| ...:..:|..|.|.|.|...|..||..|..|.::.|      
 Worm    13 QCEICGRILKSDESLRKHERIHDEAERKLECSTCQKRFHNAELLRKHQIVHDIPKKSII------ 71

  Fly   375 EFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLN 439
                                  |.:|.:.:.:.|.|.:|.:.|..:|.|||.:|..||..|....
 Worm    72 ----------------------CEVCGKKYSSKSALAKHKRTHETDKRFTCPMCYASFDLSDPFK 114

  Fly   440 IHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKI-HAGEK 477
            ||:|.|...|||.|..|.|.|:..|....|::: |..:|
 Worm   115 IHLRKHDNLKPFGCSYCFKQFSSRSVCRRHVQLMHENQK 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 23/102 (23%)
C2H2 Zn finger 256..276 CDD:275368
zf-H2C2_2 268..293 CDD:290200
C2H2 Zn finger 284..304 CDD:275368
zf-H2C2_2 296..321 CDD:290200 3/9 (33%)
zf-C2H2_2 312..>387 CDD:289522 19/75 (25%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 0/19 (0%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:290200 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..462 CDD:290200 11/24 (46%)
C2H2 Zn finger 453..473 CDD:275368 6/20 (30%)
zf-H2C2_2 465..490 CDD:290200 3/14 (21%)
C2H2 Zn finger 481..501 CDD:275368
Y37E11B.1NP_001023441.1 C2H2 Zn finger 14..34 CDD:275368 7/19 (37%)
C2H2 Zn finger 43..63 CDD:275368 8/19 (42%)
C2H2 Zn finger 72..92 CDD:275368 5/19 (26%)
C2H2 Zn finger 100..120 CDD:275368 8/19 (42%)
C2H2 Zn finger 128..145 CDD:275368 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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