DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and hinf-1

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_493579.2 Gene:hinf-1 / 173348 WormBaseID:WBGene00009553 Length:541 Species:Caenorhabditis elegans


Alignment Length:510 Identity:121/510 - (23%)
Similarity:189/510 - (37%) Gaps:103/510 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QQQPQQPQPPDLTFHCMCCAE-----FFVHPLALYQHMNTLHPHEPGNGQQ-------EQESPGD 87
            |.||....||  .::....||     ....|.|...|.:..|.|:|   ||       .|:|...
 Worm    16 QYQPSSQHPP--YYNSFGIAEPDPRHNLYAPTAPPHHHHHHHQHQP---QQHLHYMIDSQDSDSQ 75

  Fly    88 ESEDYSWIFEPVCELAEDGSDSSDGSASSGSDSSSSSDDDD-----------DDDDDD------- 134
            :|.|......|:.......:.:...|.:|.:||.|....::           :...||       
 Worm    76 DSVDSFRTPAPISSATRFSTHTPRASRASSNDSESGELSEEVMNHWLPMTWCERSSDDPQVFTFV 140

  Fly   135 -------SSSSSSSS------SNSSSSSSSVPTTSNSNTQQSQ--------ESVQPLHGLVAGPG 178
                   |||||...      .:.|.....|...::.||.|.:        :|:..||..|:   
 Worm   141 CLWGQCVSSSSSKDEFVDHLFGHVSVIEEGVQNGNHMNTVQCKVRGCNKHLDSIFQLHRHVS--- 202

  Fly   179 YNEFQLQMTDPRESTSIFMV-------------QPTVSVTPLQQLLPPAPTVSPGLGLQS-TPIK 229
            .:.||   .|.::..|..::             :|..::. .:.:|........|:...| |.:.
 Worm   203 MHVFQ---ADCQQKGSEALIEKEDYIGIESCGFEPCTNIN-YEGMLLNCQWEDCGMPFNSLTELF 263

  Fly   230 RRRGRR-SNIG--APVMDPALNGNQK-CFQC--THCEASFPNAGDLSKHVRSHITNKPFQCSICQ 288
            ...|.. ..:|  ..:.....||::| .|.|  |.|.....:..:|.:|.|.|...|...|..|.
 Worm   264 DHVGHHIDGVGDVDRIQQNFSNGDKKVVFPCKWTACTQVADSKANLRRHARHHSGEKVLACPFCA 328

  Fly   289 KTFTHIGSLNTH-------IRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKG 346
            :.|:....|..|       ::....|.||.|:||.|.|....:|.:|:..|.|..  .|..|..|
 Worm   329 RFFSRRDKLYDHCLRRTILMKNPEMEDPYLCKLCQKRFGTEKALCMHVTRHLVSL--TCPLCSLG 391

  Fly   347 FINYSSLLLHQKT-HIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSEL 410
            ....:.|..|..| |...::.|.|..|.:.|..|:.|:.|...|: :::|.|..|.|.|:...:|
 Worm   392 LGCRAELHRHLMTKHSRRSKDFKCDTCSKLFFTESELNRHAVYHS-DVMYSCKHCPEKFKWKKQL 455

  Fly   411 VQHMKNH---MGEKPFTCSLCDRSFTQSGSLNIH------MRIHTGEKPFQCKLC 456
            ::|||.|   ....|:||.||||::|...:|..|      ::|..|...|..|.|
 Worm   456 MKHMKEHDENFNPSPYTCHLCDRTYTTGFALGRHLTRQHRLQIPYGFSRFTYKKC 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 47/168 (28%)
C2H2 Zn finger 256..276 CDD:275368 6/21 (29%)
zf-H2C2_2 268..293 CDD:290200 8/24 (33%)
C2H2 Zn finger 284..304 CDD:275368 5/26 (19%)
zf-H2C2_2 296..321 CDD:290200 10/31 (32%)
zf-C2H2_2 312..>387 CDD:289522 23/75 (31%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 6/20 (30%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 8/19 (42%)
zf-H2C2_2 409..434 CDD:290200 12/27 (44%)
C2H2 Zn finger 425..445 CDD:275368 8/25 (32%)
zf-H2C2_2 437..462 CDD:290200 7/26 (27%)
C2H2 Zn finger 453..473 CDD:275368 2/4 (50%)
zf-H2C2_2 465..490 CDD:290200
C2H2 Zn finger 481..501 CDD:275368
hinf-1NP_493579.2 C2H2 Zn finger 299..316 CDD:275368 4/16 (25%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 359..379 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..406 CDD:275368 6/20 (30%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 442..462 CDD:275368 8/19 (42%)
C2H2 Zn finger 473..494 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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