DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and Zfp358

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_536709.2 Gene:Zfp358 / 140482 MGIID:2153740 Length:571 Species:Mus musculus


Alignment Length:712 Identity:187/712 - (26%)
Similarity:278/712 - (39%) Gaps:199/712 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ITPILQQTHLLPQ------QAPNPPQQQPQQPQPPDLTFHCMCCAEFFVHPLALYQHMNTLHPHE 74
            :.|:....|..|:      :.|:|..:.| :|:|.||                     ||:  .|
Mouse    15 LRPLYGDLHSDPEDLDSSPKDPDPISESP-EPEPEDL---------------------NTV--SE 55

  Fly    75 PGNGQQEQESP-GDESEDYSWIFEPVCELAEDGSDSSDGSASSGSDSSSSSDDDDDDDD------ 132
            .|:...|...| .||:        |...|.:...||.|      .|..|||.|.|.|.|      
Mouse    56 DGDASLEDLDPEADEA--------PRSILGKPDLDSQD------LDPMSSSFDLDPDPDVIGPVP 106

  Fly   133 ---DDSSSSSSSSSNSSSSSSSVPTTSNSNTQQSQESVQPLHGLVAGPGYNEFQLQMTDPRESTS 194
               |.|:.:.|.::....|..|                    ||.|.|                 
Mouse   107 LVLDPSNDTPSPAAPDVDSLPS--------------------GLTATP----------------- 134

  Fly   195 IFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPALNGNQKCFQCTHC 259
                          ::|..:|.|.|                    ||...|      :.|.|..|
Mouse   135 --------------EILATSPAVLP--------------------APASPP------RPFSCPDC 159

  Fly   260 EASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSS 324
            ..:|..:..||:|.|:|...||::|..|.|:|:|..:|..|..||:|.:||:|..|.|||...|:
Mouse   160 GRAFRRSSGLSQHRRTHSGEKPYRCPDCGKSFSHGATLAQHRGIHTGARPYQCAACGKAFGWRST 224

  Fly   325 LMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMH 389
            |:.|..|||..|||.|..|.|.|.:.|.|..|.:||..| ....||.|.:.|...:.|.:|:|.|
Mouse   225 LLKHRSSHSGEKPHHCPVCGKAFGHGSLLAQHLRTHGGP-RPHKCPVCAKGFGQGSALLKHLRTH 288

  Fly   390 TQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCK 454
            |.|..|.|..|.:||..||.|:||.:.|..|:|:.|..|.::|.||.:|..|:||||||:|:.|.
Mouse   289 TGERPYPCPQCGKAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACP 353

  Fly   455 LCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTS------- 512
            .|.|.|.|:|:|..|:.:|:||:||.|.:|||::.|.:.|.||.:.|:.|:||:|:.:       
Mouse   354 HCSKAFGQSSALLQHLHVHSGERPYRCQLCGKAFGQASSLTKHKRVHEGAAAAAAAAAAAAAAAA 418

  Fly   513 ------------------PGLLVAKQPHETLVCIVCGSLHADATALASHVHSQHAALLDTMKQSG 559
                              ||.:....|....|......|.:.|::..|   |...::|.:::...
Mouse   419 AAAGLGLGSGLSPVSMMRPGQISFLGPDAVSVLESGLGLSSGASSARS---SAPTSVLGSLQNPI 480

  Fly   560 MNTAPGG-AIPDVKCSAEEQQAYVERVQCVLQQMNHQQQHQQHQQQPPQQQQQHPQQQQQQHLQQ 623
            :.|..|. :.||:..|::.:..:|.....|                |...|:..|.         
Mouse   481 LQTHSGSISSPDLVLSSDPKPGHVADPDVV----------------PSPDQESDPS--------- 520

  Fly   624 QPHQMQLPQQPKLPAMDSTGEDEEEPDEAEEPPDEEEEQDEPEEPAEVKTEVLAAEDALTNP 685
                   |....:|:.|      .:|....:|.....:...|..|.....:.:..|.||..|
Mouse   521 -------PNPDLVPSPD------PKPKSQTDPCSPTHDSSSPALPTGESPKWVKEEGALLGP 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 65/158 (41%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
zf-H2C2_2 268..293 CDD:290200 11/24 (46%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
zf-H2C2_2 296..321 CDD:290200 12/24 (50%)
zf-C2H2_2 312..>387 CDD:289522 30/74 (41%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 9/19 (47%)
zf-H2C2_2 409..434 CDD:290200 9/24 (38%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..462 CDD:290200 13/24 (54%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
zf-H2C2_2 465..490 CDD:290200 11/24 (46%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
Zfp358NP_536709.2 zf-C2H2 154..176 CDD:278523 8/21 (38%)
C2H2 Zn finger 156..176 CDD:275368 7/19 (37%)
zf-H2C2_2 169..193 CDD:290200 11/23 (48%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
zf-H2C2_2 197..219 CDD:290200 10/21 (48%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
zf-H2C2_2 225..247 CDD:290200 11/21 (52%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
zf-H2C2_2 253..275 CDD:290200 8/22 (36%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
zf-H2C2_2 280..303 CDD:290200 9/22 (41%)
zf-C2H2_8 295..373 CDD:292531 34/77 (44%)
C2H2 Zn finger 296..316 CDD:275368 9/19 (47%)
zf-H2C2_2 308..331 CDD:290200 8/22 (36%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
zf-H2C2_2 336..359 CDD:290200 12/22 (55%)
C2H2 Zn finger 352..372 CDD:275368 8/19 (42%)
zf-H2C2_2 364..387 CDD:290200 11/22 (50%)
zf-C2H2 378..400 CDD:278523 9/21 (43%)
C2H2 Zn finger 380..400 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 245 1.000 Inparanoid score I3267
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.