DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and LOC110437726

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_021331500.1 Gene:LOC110437726 / 110437726 -ID:- Length:550 Species:Danio rerio


Alignment Length:392 Identity:125/392 - (31%)
Similarity:200/392 - (51%) Gaps:60/392 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 LNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYK 311
            ::..:|.::|.||..||....:...|:|.|...||::|..|...||...:|..|:|:|:|||.:.
Zfish    95 IHTGEKPYECQHCGKSFNQKQNCEAHMRIHTGEKPYKCQQCDMQFTQKANLTVHMRVHTGEKTFN 159

  Fly   312 CELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREF 376
            |:.|.|:|.|..:|.||||.|:..||:||.||.|.|....:|.:|.|.|.. .:.|.|.||.:.|
Zfish   160 CQHCGKSFFQKQNLNVHMRVHTGEKPYQCQQCGKSFSQPQNLNVHLKVHTG-EKPFTCQECGKSF 223

  Fly   377 KAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIH 441
            ..:...:.|||:||.|.:|:|..|.::|...:.|..||..|...|||:|..|.:||.|...|.:|
Zfish   224 IHKQKFEAHMRIHTGEKLYKCLQCGKSFSQKTYLEDHMGIHAEVKPFSCQQCGKSFNQKQKLKMH 288

  Fly   442 MRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASA 506
            ||:||||||:.|:.|.:.|:||.||.|||::|.|||||.|..|||:::|:.:|:||.:.|     
Zfish   289 MRVHTGEKPYSCQHCGRSFSQAPSLEVHMRVHTGEKPYTCDQCGKTFAQKGHLDKHTRVH----- 348

  Fly   507 ASASTSPGLLVAKQPHETLVCIVCGSLHADATALASH--VHSQHAALLDTMKQSGMNTAPGGAIP 569
                      ..::|:   .|.:||...|..:.|..|  :|::....:  ..|.|          
Zfish   349 ----------TGEKPY---TCDLCGISFAQKSNLNRHLKIHTKEKPYM--CPQCG---------- 388

  Fly   570 DVKCSAEEQQAYVERVQCVLQQMNHQQQHQQ-HQQQPP---------QQQQQHPQQQQQQHLQQQ 624
                     ::::::|..        |:|.. |:::.|         ..::|:.:...:.|..::
Zfish   389 ---------KSFIQKVTL--------QEHMNIHREEKPFSCPECGKSFSKKQNLKIHLRDHTGEK 436

  Fly   625 PH 626
            |:
Zfish   437 PY 438

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 60/158 (38%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
zf-H2C2_2 268..293 CDD:290200 8/24 (33%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
zf-H2C2_2 296..321 CDD:290200 11/24 (46%)
zf-C2H2_2 312..>387 CDD:289522 29/74 (39%)
C2H2 Zn finger 312..332 CDD:275368 10/19 (53%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 11/24 (46%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..462 CDD:290200 13/24 (54%)
C2H2 Zn finger 453..473 CDD:275368 10/19 (53%)
zf-H2C2_2 465..490 CDD:290200 15/24 (63%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
LOC110437726XP_021331500.1 COG5048 73..485 CDD:227381 125/392 (32%)