DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and znf1072

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_017211094.1 Gene:znf1072 / 108183695 ZFINID:ZDB-GENE-110913-146 Length:361 Species:Danio rerio


Alignment Length:344 Identity:109/344 - (31%)
Similarity:169/344 - (49%) Gaps:28/344 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FQLQMTDPRESTSIFMV-QPTVSVTPLQQ----------LLPPAPTVSPGLGLQSTPIKRRR--- 232
            |.::..|.:|.|.:.:: :.|..:..:::          .....||::.....:..|.|.:.   
Zfish    17 FTVKQEDLQEQTDLMVLKEETHQLNVMEEKQQFEKHQVITTDEKPTLTKKTSSRGRPRKSKSMCN 81

  Fly   233 ----------GRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSIC 287
                      .::||:.   :...::..:|.:.|..|..||........|:..|...:|:.|..|
Zfish    82 YSCTRCRKSFSKKSNLD---IHMRVHTKEKPYTCKQCGKSFGYIQGFENHMSIHTGERPYTCQQC 143

  Fly   288 QKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSS 352
            .|:|.|.|:...|:|.|:||:.|.|:.|.|:|:::.:|.||||.|:..||:.|.||.|.|....:
Zfish   144 GKSFYHAGNFAAHMRTHTGERKYTCQHCGKSFSKTGNLAVHMRIHTGEKPYSCSQCGKSFKQNVT 208

  Fly   353 LLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNH 417
            |.:|.:|| .....|.|.:|.:....:..||.|||:||.|..|.|..|.::|.....|..||.:|
Zfish   209 LKIHMRTH-NEERIFTCTQCGKSISHKHYLDIHMRIHTGEKPYTCTECGKSFPYKGSLKHHMLSH 272

  Fly   418 MGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCP 482
            .|||||||:.|.:|||...||..||..|||...|.|..|.|.||:..|:..|||.|:||..:.|.
Zfish   273 TGEKPFTCAQCGKSFTTKTSLMNHMDGHTGIIVFTCDQCGKTFTRKDSMKQHMKTHSGEDSFRCS 337

  Fly   483 ICGKSYSQQAYLNKHIQAH 501
            .|||.:..:..|:.|::.|
Zfish   338 ECGKGFKCKRSLSTHLKLH 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 56/158 (35%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
zf-H2C2_2 268..293 CDD:290200 7/24 (29%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:290200 10/24 (42%)
zf-C2H2_2 312..>387 CDD:289522 27/74 (36%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 14/24 (58%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..462 CDD:290200 12/24 (50%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
zf-H2C2_2 465..490 CDD:290200 11/24 (46%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
znf1072XP_017211094.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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