DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and znf1008

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_005171144.1 Gene:znf1008 / 101886637 ZFINID:ZDB-GENE-131121-84 Length:390 Species:Danio rerio


Alignment Length:405 Identity:131/405 - (32%)
Similarity:200/405 - (49%) Gaps:46/405 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 SGSDSSSSSDDDD---------DDDDDDSSSSSSSSSNSSSSSSSVPTTSNSNTQQSQESVQPLH 171
            |.:::.:.:|:|.         :|::.:...||:|...|||.|.:.|...:.:..|..:|     
Zfish     3 SDAETHTMTDEDTEGLAEQMKVEDEEVNEEKSSTSEEKSSSGSETAPPKGSFSCPQCGKS----- 62

  Fly   172 GLVAGPGYNEFQLQM-TDPRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRRGRR 235
              ....|:.|..:.: |..|..|                 .|.........|......:...|.|
Zfish    63 --FTRKGHLEVHMVIHTGERPYT-----------------CPQCAKSFTCKGSLKDHFRIHTGER 108

  Fly   236 -----------SNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQK 289
                       :|.|.......::..::.|.|..|..|||::|:|.:|:|.|..::|:.|..|.|
Zfish   109 PFTCPQCEKSFTNSGGLKRHLRIHTGERPFTCRQCAKSFPSSGELKRHMRIHSRDRPYTCPQCGK 173

  Fly   290 TFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLL 354
            ::.....|..|.:.||||||:.|.||.|:|||.|:|.|||:.||..|.|||.:|.:.|....:|.
Zfish   174 SYKQKEVLREHTKTHSGEKPFTCTLCGKSFTQQSTLKVHMKVHSGEKLHQCPECGRRFAEACNLK 238

  Fly   355 LHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMG 419
            .|..:|.. ...|.|.:||::|.....|..|||:|..|..|.|:.|.::|...:....|.|.|:|
Zfish   239 THLLSHTG-ERPFSCEKCEKKFFLAVHLKTHMRIHEDERRYVCSFCGKSFLWLNGFKDHQKTHIG 302

  Fly   420 EKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPIC 484
            |||:.|..|.::|.::..|.:|.||||||||::|..|:|.|||:|.|.||.::|.|||||.||.|
Zfish   303 EKPYECLECGKTFARAAELKVHERIHTGEKPYKCSHCEKSFTQSSGLKVHERVHTGEKPYLCPTC 367

  Fly   485 GKSYSQQAYLNKHIQ 499
            ||::|:...|.||::
Zfish   368 GKTFSRYGSLAKHLK 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 61/158 (39%)
C2H2 Zn finger 256..276 CDD:275368 9/19 (47%)
zf-H2C2_2 268..293 CDD:290200 8/24 (33%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
zf-H2C2_2 296..321 CDD:290200 13/24 (54%)
zf-C2H2_2 312..>387 CDD:289522 30/74 (41%)
C2H2 Zn finger 312..332 CDD:275368 12/19 (63%)
C2H2 Zn finger 340..360 CDD:275368 5/19 (26%)
C2H2 Zn finger 369..389 CDD:275368 8/19 (42%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:290200 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..462 CDD:290200 14/24 (58%)
C2H2 Zn finger 453..473 CDD:275368 10/19 (53%)
zf-H2C2_2 465..490 CDD:290200 14/24 (58%)
C2H2 Zn finger 481..501 CDD:275368 9/19 (47%)
znf1008XP_005171144.1 C2H2 Zn finger 56..76 CDD:275368 4/26 (15%)
zf-H2C2_2 68..93 CDD:290200 5/41 (12%)
COG5048 80..>383 CDD:227381 114/321 (36%)
C2H2 Zn finger 84..104 CDD:275368 2/19 (11%)
zf-H2C2_2 96..121 CDD:290200 2/24 (8%)
C2H2 Zn finger 112..132 CDD:275368 2/19 (11%)
zf-H2C2_2 125..147 CDD:290200 3/21 (14%)
C2H2 Zn finger 140..160 CDD:275368 9/19 (47%)
zf-H2C2_2 152..177 CDD:290200 8/24 (33%)
C2H2 Zn finger 168..188 CDD:275368 5/19 (26%)
zf-H2C2_2 181..205 CDD:290200 13/23 (57%)
C2H2 Zn finger 196..216 CDD:275368 12/19 (63%)
zf-H2C2_2 209..232 CDD:290200 11/22 (50%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..272 CDD:275368 8/19 (42%)
C2H2 Zn finger 280..300 CDD:275368 5/19 (26%)
C2H2 Zn finger 308..328 CDD:275368 6/19 (32%)
zf-H2C2_2 320..345 CDD:290200 14/24 (58%)
C2H2 Zn finger 336..356 CDD:275368 10/19 (53%)
zf-H2C2_2 349..373 CDD:290200 14/23 (61%)
C2H2 Zn finger 364..382 CDD:275368 9/17 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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