DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and si:cabz01054394.5

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_009299258.1 Gene:si:cabz01054394.5 / 101886221 ZFINID:ZDB-GENE-161017-87 Length:441 Species:Danio rerio


Alignment Length:270 Identity:99/270 - (36%)
Similarity:138/270 - (51%) Gaps:29/270 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 CTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFT 320
            |:.|..||.....|..|:..|...|||.|..|.|:||..|:|..|:.||:||....|:.|.|:||
Zfish    82 CSQCGKSFDRKKKLDVHMTIHTGEKPFSCQQCGKSFTQKGNLKVHMGIHTGENSVSCQQCGKSFT 146

  Fly   321 QSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEH 385
            |..:|.||||.|:..||:.|.||.:.|.:.::|..|.::| :..:.|:|.:|...|..:..|:.|
Zfish   147 QKINLKVHMRIHTGEKPYSCGQCGQSFTHKNNLNAHMRSH-SGQKMFMCGQCGTRFTRKGGLENH 210

  Fly   386 MRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKP 450
            ||:||.|..::|..|...|...:.|..|||.|.|||||.|..|.:||.:..:|:.|.||||||:|
Zfish   211 MRIHTGEKPFKCGQCGRRFTRKASLGTHMKIHTGEKPFPCDQCRKSFRRKVTLDSHKRIHTGERP 275

  Fly   451 FQCKLCDKCFTQASSLSVHMKIHAG----------------------------EKPYPCPICGKS 487
            |.|..|.|.|....:|:.||:||:.                            ||.:.|..||||
Zfish   276 FVCFQCGKSFRFTGNLNQHMRIHSNKRTHNLNGFKCLQRGGSFRDFRNHLLTKEKAFMCRCCGKS 340

  Fly   488 YSQQAYLNKH 497
            ::....|..|
Zfish   341 FTNSRNLKLH 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 58/156 (37%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
zf-H2C2_2 268..293 CDD:290200 10/24 (42%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:290200 10/24 (42%)
zf-C2H2_2 312..>387 CDD:289522 27/74 (36%)
C2H2 Zn finger 312..332 CDD:275368 11/19 (58%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
zf-H2C2_2 409..434 CDD:290200 14/24 (58%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..462 CDD:290200 14/24 (58%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
zf-H2C2_2 465..490 CDD:290200 12/52 (23%)
C2H2 Zn finger 481..501 CDD:275368 7/17 (41%)
si:cabz01054394.5XP_009299258.1 COG5048 <50..308 CDD:227381 90/226 (40%)
C2H2 Zn finger 82..102 CDD:275368 6/19 (32%)
C2H2 Zn finger 110..130 CDD:275368 8/19 (42%)
C2H2 Zn finger 138..158 CDD:275368 11/19 (58%)
C2H2 Zn finger 166..186 CDD:275368 6/19 (32%)
C2H2 Zn finger 194..214 CDD:275368 7/19 (37%)
C2H2 Zn finger 222..242 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 334..350 CDD:275368 6/15 (40%)
C2H2 Zn finger 358..401 CDD:275368
C2H2 Zn finger 409..426 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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