DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and znf1040

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_017211075.1 Gene:znf1040 / 101884948 ZFINID:ZDB-GENE-141210-11 Length:420 Species:Danio rerio


Alignment Length:447 Identity:127/447 - (28%)
Similarity:196/447 - (43%) Gaps:70/447 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FQLQMTDPRESTSIFMVQPTV----SVTPLQQLLPP-------APTVSPGLGLQSTPIKRRRGRR 235
            |.::..|.:|.|.:.:::...    .:...||...|       .||::........|.|.:.|  
Zfish    17 FTVKQEDLQEQTDLMVLKEETHGQNEIDEKQQFEKPQEIMTDEKPTLTKKTSSHGRPRKSKSG-- 79

  Fly   236 SNIGAPVMDPALNGNQKC-FQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNT 299
                             | |.|..|..||.....|..|:|.|...:||.|..|.|:|........
Zfish    80 -----------------CNFSCKQCSKSFSQKSKLDVHMRVHTREQPFTCEQCGKSFGQKQGFKA 127

  Fly   300 HIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPT 364
            |:|||:|::.:.|:.|.|:|..:.:...|||.|:..||..|.||.|.|.:..:|.:|.:.|.. .
Zfish   128 HMRIHTGKRKFTCQQCGKSFYHAGNFAAHMRIHTGEKPFSCKQCGKSFCHKPNLDVHMRVHTG-E 191

  Fly   365 ETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCD 429
            :.:.|.:|.|.|..:...:.|||:||.:....|..|.::|..:..|..||..|.||:||:|.||.
Zfish   192 KPYTCEQCGRSFGQKQSFNTHMRIHTGKRPCTCQQCEKSFYNARSLAAHMITHTGERPFSCILCG 256

  Fly   430 RSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYL 494
            :||:...:|..|||:||.|||..|:.|.|.|.|...|.:||:||.|||||.|..||||:...:.|
Zfish   257 KSFSLKLTLIAHMRVHTREKPHICEQCGKSFGQKQDLDIHMRIHTGEKPYTCTECGKSFPHISSL 321

  Fly   495 NKHIQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHADATALASHVHSQHAALLDTMKQSG 559
            ..||:.|               ..::|   ..|..||......|:|.:|::.....::.|..|.|
Zfish   322 KHHIRTH---------------TGEKP---FTCAQCGKSFTTKTSLKNHMNGHTGTIVFTCDQCG 368

  Fly   560 MN-TAPGGAIPDVKCSAEEQQAYVERVQC--------------VLQQMNHQQQHQQH 601
            .: |........:|..:.|     :|.:|              ...::::.:|:.||
Zfish   369 KSLTRKDSITKHMKIHSRE-----DRFRCSECGKGFKSKRSLNTHMKLHNGEQNPQH 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 51/158 (32%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
zf-H2C2_2 268..293 CDD:290200 10/24 (42%)
C2H2 Zn finger 284..304 CDD:275368 6/19 (32%)
zf-H2C2_2 296..321 CDD:290200 9/24 (38%)
zf-C2H2_2 312..>387 CDD:289522 23/74 (31%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 13/24 (54%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..462 CDD:290200 13/24 (54%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
zf-H2C2_2 465..490 CDD:290200 15/24 (63%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
znf1040XP_017211075.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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