DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and si:cabz01071912.2

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_003198590.1 Gene:si:cabz01071912.2 / 100535458 ZFINID:ZDB-GENE-161017-141 Length:351 Species:Danio rerio


Alignment Length:368 Identity:125/368 - (33%)
Similarity:180/368 - (48%) Gaps:38/368 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FQLQMTDPRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPA 246
            |:::..||:|.|.:.:  |......|.:|....|..:..:.          |.|| :..|..:..
Zfish    17 FRVKQEDPQEQTDLLL--PKKENQDLNKLKIEDPHSNHFIA----------GERS-LRCPQTEKT 68

  Fly   247 -LNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPY 310
             |....|||:   ||..|.:.....:|:.:|.|:..|.|.:|.:...:..:...|:::|:.|||:
Zfish    69 FLQRANKCFE---CEKVFQSKKKFKEHMLTHFTDGCFTCQLCGRRCKNWRAFEHHMKVHTVEKPF 130

  Fly   311 KCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECERE 375
            .|:.|||.|.|..:|.:||:.|:..||..|.||.|.|....:|.||.|.|.. .:.|.|.:|...
Zfish   131 SCQQCPKTFAQKDNLKLHMKVHTGEKPFSCEQCPKTFARKDNLKLHMKVHTG-EKPFTCQQCGTT 194

  Fly   376 FKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNI 440
            |.....|..|:|:||.|..:.|..|.::|.....|..||:.|.|||||||..|.:.|:.|.:|||
Zfish   195 FARNDNLKSHIRVHTGEKPFTCPECGKSFIQQGILKVHMRIHSGEKPFTCQQCGKVFSHSLNLNI 259

  Fly   441 HMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMAS 505
            |||:|||||||.||.|.|.|:|..:|.:||:.|.||||:.|..||||:.....|..|::.|    
Zfish   260 HMRVHTGEKPFTCKPCGKSFSQIGTLKLHMRTHTGEKPFSCQQCGKSFRVNMKLKNHMKVH---- 320

  Fly   506 AASASTSPGLLVAKQPHETLVCIVCGSLHADATALASH--VHS 546
                 |...|...:|         ||........|:||  ||:
Zfish   321 -----TGEKLFTCQQ---------CGVSFRVKKTLSSHMKVHA 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 51/158 (32%)
C2H2 Zn finger 256..276 CDD:275368 4/19 (21%)
zf-H2C2_2 268..293 CDD:290200 6/24 (25%)
C2H2 Zn finger 284..304 CDD:275368 3/19 (16%)
zf-H2C2_2 296..321 CDD:290200 10/24 (42%)
zf-C2H2_2 312..>387 CDD:289522 28/74 (38%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 9/19 (47%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 13/24 (54%)
C2H2 Zn finger 425..445 CDD:275368 10/19 (53%)
zf-H2C2_2 437..462 CDD:290200 18/24 (75%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
zf-H2C2_2 465..490 CDD:290200 13/24 (54%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
si:cabz01071912.2XP_003198590.1 C2H2 Zn finger 76..96 CDD:275368 6/22 (27%)
C2H2 Zn finger 104..124 CDD:275368 3/19 (16%)
C2H2 Zn finger 132..152 CDD:275368 9/19 (47%)
zf-H2C2_2 144..169 CDD:290200 11/24 (46%)
COG5048 <156..316 CDD:227381 72/160 (45%)
C2H2 Zn finger 160..180 CDD:275368 9/19 (47%)
zf-H2C2_2 172..197 CDD:290200 9/25 (36%)
C2H2 Zn finger 188..208 CDD:275368 6/19 (32%)
zf-H2C2_2 200..225 CDD:290200 9/24 (38%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
zf-H2C2_2 229..253 CDD:290200 13/23 (57%)
C2H2 Zn finger 244..264 CDD:275368 10/19 (53%)
zf-H2C2_2 256..281 CDD:290200 18/24 (75%)
C2H2 Zn finger 272..292 CDD:275368 9/19 (47%)
zf-H2C2_2 285..307 CDD:290200 12/21 (57%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 328..348 CDD:275368 6/28 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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