DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12299 and si:dkey-262g12.3

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_009299305.1 Gene:si:dkey-262g12.3 / 100534843 ZFINID:ZDB-GENE-060503-255 Length:389 Species:Danio rerio


Alignment Length:399 Identity:125/399 - (31%)
Similarity:193/399 - (48%) Gaps:33/399 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FQLQMTDPRESTSIFMVQPTVSVTPLQQLLPPAPTVSPGLGLQSTPIKRRRGRRSNIGAPVMDPA 246
            |.::..||.::....:.:.|..:..:::......||.     :||.|||....:.:     .:..
Zfish    17 FTIKQEDPGQTELTMLKEETQELNEMEEKDQDLKTVE-----KSTKIKRTSPHKRD-----QETK 71

  Fly   247 LNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYK 311
            ..||..|.||..|   |....:|..|:.:|...||..|..|.|:|.....|..|:|||:||||:.
Zfish    72 STGNFTCSQCGKC---FAQKHNLRVHMSAHTREKPHLCPECGKSFRRKQYLAVHMRIHTGEKPFS 133

  Fly   312 CELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREF 376
            |:.|.|:|.||..|..|:|.|:..||:.|.||...:|:...|..|...| ...:.|:||:|.:.|
Zfish   134 CDQCGKSFRQSIILRHHIRLHTGEKPYACPQCGVRYIHKQRLEKHMAVH-NEDKPFVCPQCGKSF 197

  Fly   377 KAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSFTQSGSLNIH 441
            .....|.:||::||.|..:.|..|.::|....::..||:.|.||:|:.||.|.:||||.|:|:.|
Zfish   198 TLNLNLKQHMKIHTGEKPFVCQQCGKSFNHKQQVEVHMRVHTGERPYICSQCGKSFTQKGNLDHH 262

  Fly   442 MRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASA 506
            ||.|..|:|:.|..|.:..|..|||..||:.|..:|||.|..||:|:::::.|..|.:||     
Zfish   263 MRTHARERPYTCTKCGRNLTSQSSLDAHMRTHTEKKPYACSECGQSFAKRSVLKVHRRAH----- 322

  Fly   507 ASASTSPGLLVAKQPHETLVCIVCGSLHADATALASHVHSQHAALLDTMKQSGMNTAPGGAIP-D 570
                         ...:|..|..||..:...|.|.||:.:..........|.|.:....|::. .
Zfish   323 -------------TGEQTYTCTRCGKNYTSKTYLKSHMRTHTGEKPFVCGQCGKSFYHRGSLSYH 374

  Fly   571 VKCSAEEQQ 579
            :|..:|||:
Zfish   375 MKSHSEEQK 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 55/158 (35%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
zf-H2C2_2 268..293 CDD:290200 9/24 (38%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
zf-H2C2_2 296..321 CDD:290200 13/24 (54%)
zf-C2H2_2 312..>387 CDD:289522 26/74 (35%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:290200 11/24 (46%)
C2H2 Zn finger 425..445 CDD:275368 12/19 (63%)
zf-H2C2_2 437..462 CDD:290200 9/24 (38%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
zf-H2C2_2 465..490 CDD:290200 12/24 (50%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
si:dkey-262g12.3XP_009299305.1 COG5048 <54..225 CDD:227381 62/179 (35%)
C2H2 Zn finger 78..98 CDD:275368 7/22 (32%)
C2H2 Zn finger 106..126 CDD:275368 7/19 (37%)
C2H2 Zn finger 134..154 CDD:275368 9/19 (47%)
C2H2 Zn finger 162..182 CDD:275368 6/19 (32%)
C2H2 Zn finger 190..210 CDD:275368 7/19 (37%)
C2H2 Zn finger 218..238 CDD:275368 5/19 (26%)
SFP1 <235..323 CDD:227516 40/105 (38%)
C2H2 Zn finger 246..266 CDD:275368 12/19 (63%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 342..367 CDD:316026 5/24 (21%)
C2H2 Zn finger 358..378 CDD:275368 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.