DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and si:ch211-222k6.1

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_021324960.1 Gene:si:ch211-222k6.1 / 100034531 ZFINID:ZDB-GENE-050208-649 Length:674 Species:Danio rerio


Alignment Length:484 Identity:133/484 - (27%)
Similarity:191/484 - (39%) Gaps:131/484 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 NSNTQQSQESV---QPLHGLVAGPGYNEFQLQMTDPRESTSI-FMVQPTVSVTPLQQLLPPAPTV 217
            |..|.:..|:|   |..||                 ::|||: |..:|.|..|        .|..
Zfish    24 NGETGEQLEAVEKHQDTHG-----------------QKSTSLSFQSRPEVHFT--------CPQC 63

  Fly   218 SPGLGLQST---PIKRRRGRRSNIGAP----------VMDPALNGNQK------CFQCTHCEASF 263
            ......:.:   .:|..||.:     |          .:...||.:.|      .:.|..|..||
Zfish    64 GKSFSCEQSLNLHMKFHRGTK-----PYECDQCDKIFTLKTNLNEHMKIHNVDMLYTCDQCGKSF 123

  Fly   264 PNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVH 328
            .....|:||::.|...|||.|..|.|.|.|.|.|..||:||:||||:.|:.|.|.|....:|..|
Zfish   124 LLKERLNKHLKIHTGEKPFTCDQCGKNFLHKGYLTEHIKIHTGEKPHTCDQCGKRFAYKGNLTDH 188

  Fly   329 MRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQEL 393
            |:.|:..:|:.|.||.|.|.:..:|:.|.|.|.. ...:.|.:|.::||.:.:|.:|||:||.|.
Zfish   189 MKVHTGERPYACDQCAKRFKHKGNLIEHVKIHTG-ERPYSCDQCGKKFKLKHILSDHMRIHTGEK 252

  Fly   394 VYQCAICREAFRASSELVQHMKNHMG----------------------------EKPFTCSLCDR 430
            .:.|..|..::.....|..|||:|.|                            |:||.|..|.:
Zfish   253 PFTCEKCGRSYTRKRNLSDHMKSHTGVKLHTCDQCGKSFVKTGVFKVHLRTHSRERPFNCDQCGK 317

  Fly   431 SFTQSGSLNIHMR----------------------------IHTGEKPFQCKLCDKCFTQASSLS 467
            .|.:.|:|.:|.:                            :|||||||:|..|:|.|.:|..:.
Zfish   318 DFLRMGTLKVHQKRHSGIKDHICSECGKTFFRDSELKVHQSVHTGEKPFKCSHCEKTFKRAEYMK 382

  Fly   468 VHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAK------------- 519
            :|.|||.|||||.|..|||.:..:...|.|::.|......|..........|             
Zfish   383 MHRKIHTGEKPYECEKCGKKFRHKGNFNDHVKNHTRIKPFSCDQCGKCFRLKDNFDDHMKVHTGG 447

  Fly   520 QPHETLVCIVCGSLHADATALASHVHSQH 548
            .||   .|..||.     |....||.::|
Zfish   448 NPH---TCAQCGK-----TFKQKHVLNEH 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 58/158 (37%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
zf-H2C2_2 268..293 CDD:290200 11/24 (46%)
C2H2 Zn finger 284..304 CDD:275368 9/19 (47%)
zf-H2C2_2 296..321 CDD:290200 13/24 (54%)
zf-C2H2_2 312..>387 CDD:289522 24/74 (32%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 8/19 (42%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 12/52 (23%)
C2H2 Zn finger 425..445 CDD:275368 6/47 (13%)
zf-H2C2_2 437..462 CDD:290200 13/52 (25%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
zf-H2C2_2 465..490 CDD:290200 13/24 (54%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
si:ch211-222k6.1XP_021324960.1 C2H2 Zn finger 60..80 CDD:275368 2/19 (11%)
C2H2 Zn finger 88..108 CDD:275368 3/19 (16%)
C2H2 Zn finger 116..136 CDD:275368 7/19 (37%)
C2H2 Zn finger 144..164 CDD:275368 9/19 (47%)
zf-H2C2_2 156..181 CDD:316026 13/24 (54%)
C2H2 Zn finger 172..192 CDD:275368 7/19 (37%)
COG5048 196..607 CDD:227381 77/282 (27%)
C2H2 Zn finger 200..220 CDD:275368 8/19 (42%)
C2H2 Zn finger 228..248 CDD:275368 8/19 (42%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 0/19 (0%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 0/19 (0%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 396..416 CDD:275368 6/19 (32%)
C2H2 Zn finger 424..444 CDD:275368 1/19 (5%)
C2H2 Zn finger 452..472 CDD:275368 7/22 (32%)
C2H2 Zn finger 480..500 CDD:275368
C2H2 Zn finger 508..528 CDD:275368
C2H2 Zn finger 536..556 CDD:275368
C2H2 Zn finger 564..584 CDD:275368
C2H2 Zn finger 592..612 CDD:275368
C2H2 Zn finger 620..640 CDD:275368
C2H2 Zn finger 648..666 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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