DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and zgc:174314

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:NP_001107958.1 Gene:zgc:174314 / 100007842 ZFINID:ZDB-GENE-080213-5 Length:359 Species:Danio rerio


Alignment Length:377 Identity:123/377 - (32%)
Similarity:179/377 - (47%) Gaps:49/377 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FQLQMTDPRESTSIFMV-QPTVSVTPLQQ-----LLPPAPTVSPGLGLQSTPIKRRRGRRSNIGA 240
            |.::..|.:|.|.:.:: :.|.....:::     :....||      |......|.|.|:|    
Zfish    17 FTVKQEDLQEQTDLMVLKEETHQCNEMEEKHQDIMADEKPT------LTKKTSSRGRPRKS---- 71

  Fly   241 PVMDPALNGNQKC-FQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKTFTHIGSLNTHIRIH 304
                     ..|| |.......:|.....|..|:|.|...||..|..|.|:|..||:|..|:|||
Zfish    72 ---------KSKCNFSSKQRRKTFSQKPKLDVHMRVHTGEKPCTCKQCGKSFYTIGNLTVHMRIH 127

  Fly   305 SGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLLHQKTHIAPTE--TF 367
            :|||||.||.|.|:|.:..:...|||.|:..:|:.|.||.|.|.:..:|::|.:.|   ||  .:
Zfish   128 TGEKPYTCEQCGKSFCKKENFKTHMRIHTGERPYTCQQCGKSFYHSGNLIMHMRIH---TEERPY 189

  Fly   368 ICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMGEKPFTCSLCDRSF 432
            .||:|.:.||....|:.|||.||.|..:.|..|.::|.....|..||:.|.||||:||:.|.:||
Zfish   190 SCPQCGKSFKQNGNLEVHMRTHTGEKRFTCTQCGKSFVKKQNLDIHMRIHTGEKPYTCTECGKSF 254

  Fly   433 TQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPICGKSYSQQAYLNKH 497
            |...|||.|||.||||.||.|..|.|.|:..|||..||..|.|...:.|..||....::.|:.:|
Zfish   255 TYKSSLNHHMRTHTGENPFACAQCGKSFSTKSSLMNHMNGHTGTIVFTCDQCGIKLKRKDYIRRH 319

  Fly   498 IQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHADATALASHVHSQHA 549
            ::.|                :::.|  ..|..||.......:|::|:...:|
Zfish   320 MKTH----------------SREDH--FRCSECGKGFTHKRSLSAHMKLHNA 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 60/160 (38%)
C2H2 Zn finger 256..276 CDD:275368 4/19 (21%)
zf-H2C2_2 268..293 CDD:290200 10/24 (42%)
C2H2 Zn finger 284..304 CDD:275368 9/19 (47%)
zf-H2C2_2 296..321 CDD:290200 15/24 (63%)
zf-C2H2_2 312..>387 CDD:289522 27/76 (36%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 369..389 CDD:275368 9/19 (47%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 13/24 (54%)
C2H2 Zn finger 425..445 CDD:275368 11/19 (58%)
zf-H2C2_2 437..462 CDD:290200 16/24 (67%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
zf-H2C2_2 465..490 CDD:290200 9/24 (38%)
C2H2 Zn finger 481..501 CDD:275368 5/19 (26%)
zgc:174314NP_001107958.1 COG5048 <71..263 CDD:227381 79/207 (38%)
zf-H2C2_2 92..116 CDD:290200 10/23 (43%)
C2H2 Zn finger 107..127 CDD:275368 9/19 (47%)
zf-H2C2_2 119..142 CDD:290200 14/22 (64%)
C2H2 Zn finger 135..155 CDD:275368 8/19 (42%)
zf-H2C2_2 147..170 CDD:290200 9/22 (41%)
C2H2 Zn finger 163..183 CDD:275368 7/19 (37%)
zf-H2C2_2 175..200 CDD:290200 9/27 (33%)
C2H2 Zn finger 191..211 CDD:275368 9/19 (47%)
zf-H2C2_2 203..227 CDD:290200 9/23 (39%)
COG5048 219..>359 CDD:227381 53/153 (35%)
C2H2 Zn finger 219..239 CDD:275368 6/19 (32%)
zf-H2C2_2 231..256 CDD:290200 13/24 (54%)
C2H2 Zn finger 247..267 CDD:275368 11/19 (58%)
zf-H2C2_2 259..284 CDD:290200 16/24 (67%)
C2H2 Zn finger 275..295 CDD:275368 9/19 (47%)
C2H2 Zn finger 331..351 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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