DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and LOC100007471

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_021326585.1 Gene:LOC100007471 / 100007471 -ID:- Length:276 Species:Danio rerio


Alignment Length:232 Identity:90/232 - (38%)
Similarity:121/232 - (52%) Gaps:29/232 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 FQCSICQKTFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKG 346
            |.||.|.|||.|.|.|..|:|||:||||:.|..|.|:|.::.:|.||:|.||..||:.       
Zfish    62 FTCSQCGKTFLHHGKLKDHLRIHTGEKPFTCPQCGKSFNKNGNLKVHLRIHSGEKPYP------- 119

  Fly   347 FINYSSLLLHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELV 411
                                  ||:|.:.|.....|..|||:||.|..:.|..|.::|:.....|
Zfish   120 ----------------------CPQCGKSFYLRIKLKVHMRVHTGESPFTCPQCGKSFKQRGNFV 162

  Fly   412 QHMKNHMGEKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGE 476
            .|::.|.||||:.|..|.:||.|.|.|.:|||:|||||||.|:.|.|.|....:|.|||::|.||
Zfish   163 NHIRIHTGEKPYICQQCGKSFHQDGGLKVHMRVHTGEKPFTCQQCGKSFNLQGNLKVHMRVHTGE 227

  Fly   477 KPYPCPICGKSYSQQAYLNKHIQAHQMASAASASTSP 513
            .|:.|..||.|:.|:..|.:|.:.|......|....|
Zfish   228 SPFTCTQCGLSFRQKISLKRHWRIHSAGKTFSVEQRP 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 45/130 (35%)
C2H2 Zn finger 256..276 CDD:275368
zf-H2C2_2 268..293 CDD:290200 7/10 (70%)
C2H2 Zn finger 284..304 CDD:275368 11/19 (58%)
zf-H2C2_2 296..321 CDD:290200 13/24 (54%)
zf-C2H2_2 312..>387 CDD:289522 18/74 (24%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 0/19 (0%)
C2H2 Zn finger 369..389 CDD:275368 8/19 (42%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:290200 11/24 (46%)
C2H2 Zn finger 425..445 CDD:275368 10/19 (53%)
zf-H2C2_2 437..462 CDD:290200 15/24 (63%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
zf-H2C2_2 465..490 CDD:290200 12/24 (50%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
LOC100007471XP_021326585.1 C2H2 Zn finger 64..84 CDD:275368 11/19 (58%)
COG5048 <88..248 CDD:227381 70/188 (37%)
C2H2 Zn finger 92..112 CDD:275368 8/19 (42%)
C2H2 Zn finger 120..140 CDD:275368 8/19 (42%)
C2H2 Zn finger 148..168 CDD:275368 5/19 (26%)
C2H2 Zn finger 176..196 CDD:275368 10/19 (53%)
C2H2 Zn finger 204..224 CDD:275368 8/19 (42%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595089
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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