DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12299 and si:ch73-144d13.4

DIOPT Version :9

Sequence 1:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster
Sequence 2:XP_001343439.5 Gene:si:ch73-144d13.4 / 100004031 ZFINID:ZDB-GENE-131120-182 Length:394 Species:Danio rerio


Alignment Length:384 Identity:119/384 - (30%)
Similarity:184/384 - (47%) Gaps:48/384 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FQLQMTDPRESTSIFMVQPTVSVTPLQQLLP----------------PAPTVSPGLGLQST--PI 228
            |:::..||.|.|.:..::....|....:..|                ....::||    ||  .|
Zfish    28 FRVKHEDPEEQTDLMPLKEESEVINEVEEKPHNDHDYIAEDGSNTEKAFSELNPG----STCYLI 88

  Fly   229 KRRRG----RRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQK 289
            .:|.|    ::.|:...:.   ::..||.:.|..|..||.....|..|:|.|...||::|..|.|
Zfish    89 YQRHGSTYSQKVNLPGHIQ---IHQGQKTYTCQECGKSFNKRRYLRDHMRVHTGEKPYKCPECGK 150

  Fly   290 TFTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLL 354
            :|..:|..|.|:|||:|||||.|:.|.|:|.::..|.||.|.|:..||:.|:||.|||.:...|.
Zfish   151 SFGQVGHCNVHMRIHTGEKPYTCQECGKSFKEAGDLKVHTRIHTGEKPYSCLQCGKGFNHTGHLK 215

  Fly   355 LHQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNHMG 419
            .|.:.|.. .:.:.||:|.:.|........|||:|:.|..|.|.:|:::|.....|.:|:|.|..
Zfish   216 DHVRIHTG-EKPYTCPQCGKSFVHVGQYKVHMRIHSGEKPYTCPLCKKSFIYKLSLSRHVKIHKQ 279

  Fly   420 EKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPFQCKLCDKCFTQASSLSVHMKIHAGEKPYPCPIC 484
            :||::|..|..||:|...|..||::|:|||.|.|..|.:.:.|......|::.|:|:|||.|.:|
Zfish   280 QKPYSCEQCGDSFSQHEHLEFHMKVHSGEKAFTCPECGEGYDQMPHFGAHVRTHSGKKPYKCLLC 344

  Fly   485 GKSYSQQAYLNKHIQAHQMASAASASTSPGLLVAKQPHETLVCIVCGSLHADATALASH 543
            ||.:|..|:|..||..|               ..::|:.   |..||.......:|..|
Zfish   345 GKKFSHGAHLEVHITVH---------------TGEKPYS---CSKCGKSFTQKVSLTRH 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 59/158 (37%)
C2H2 Zn finger 256..276 CDD:275368 7/19 (37%)
zf-H2C2_2 268..293 CDD:290200 10/24 (42%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:290200 14/24 (58%)
zf-C2H2_2 312..>387 CDD:289522 25/74 (34%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 10/24 (42%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..462 CDD:290200 10/24 (42%)
C2H2 Zn finger 453..473 CDD:275368 4/19 (21%)
zf-H2C2_2 465..490 CDD:290200 10/24 (42%)
C2H2 Zn finger 481..501 CDD:275368 9/19 (47%)
si:ch73-144d13.4XP_001343439.5 C2H2 Zn finger 93..109 CDD:275368 2/18 (11%)
C2H2 Zn finger 117..137 CDD:275368 7/19 (37%)
COG5048 141..>389 CDD:227381 94/264 (36%)
C2H2 Zn finger 145..165 CDD:275368 8/19 (42%)
C2H2 Zn finger 173..193 CDD:275368 8/19 (42%)
C2H2 Zn finger 201..221 CDD:275368 8/19 (42%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
C2H2 Zn finger 257..277 CDD:275368 6/19 (32%)
C2H2 Zn finger 285..305 CDD:275368 8/19 (42%)
C2H2 Zn finger 313..333 CDD:275368 4/19 (21%)
C2H2 Zn finger 341..361 CDD:275368 9/19 (47%)
C2H2 Zn finger 369..389 CDD:275368 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595110
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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