DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-5 and ATPsynC

DIOPT Version :10

Sequence 1:NP_609447.1 Gene:Vha16-5 / 34482 FlyBaseID:FBgn0032294 Length:193 Species:Drosophila melanogaster
Sequence 2:XP_001688294.1 Gene:ATPsynC / 5666800 VectorBaseID:AGAMI1_013537 Length:138 Species:Anopheles gambiae


Alignment Length:147 Identity:33/147 - (22%)
Similarity:58/147 - (39%) Gaps:30/147 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SSVLTSAGAAYGTAVSGTGIAATAVMRP----------ELVMKSIIPVVMAGIIAIYGLVVSVLL 109
            ||....|..|....::||    .|.:||          .|..::..||.:...:..:   .:..:
Mosquito     4 SSAARIAPVARSLVLNGT----KAYIRPISSAVISQSQTLAAQNTAPVALLPQVRSF---QTTPV 61

  Fly   110 SGELAPAPKY----SLPTGYVHLAAGLSVGFAGLAAGYAVGEVGEVGVRHIALQPRLFIGMILIL 170
            :.::..|.|:    :...|.....||:...|..|..|||         |:.:|:.:||...||..
Mosquito    62 TRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYA---------RNPSLKQQLFSYAILGF 117

  Fly   171 IFAEVLGLYGLIIGIYL 187
            ..:|.:||:.|::...|
Mosquito   118 ALSEAMGLFCLMMAFLL 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-5NP_609447.1 PRK13469 46..153 CDD:469780 22/111 (20%)
ATP-synt_Vo_c_ATP6C_rpt2 123..188 CDD:349416 19/65 (29%)
ATPsynCXP_001688294.1 ATP9 62..138 CDD:164765 21/82 (26%)

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