DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-5 and ATP5MC3

DIOPT Version :9

Sequence 1:NP_609447.1 Gene:Vha16-5 / 34482 FlyBaseID:FBgn0032294 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001002258.1 Gene:ATP5MC3 / 518 HGNCID:843 Length:142 Species:Homo sapiens


Alignment Length:135 Identity:35/135 - (25%)
Similarity:56/135 - (41%) Gaps:26/135 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GTAVSGTGIAATAVMRPELVMKSIIPVVMAGIIAIYGLVVSVL---------LSGELAPAPKY-- 119
            |:.|:...|:|:.:.|||.........|..|  |..|  ||.|         :|.::..|.|:  
Human    17 GSRVAYRPISASVLSRPEASRTGEGSTVFNG--AQNG--VSQLIQREFQTSAISRDIDTAAKFIG 77

  Fly   120 --SLPTGYVHLAAGLSVGFAGLAAGYAVGEVGEVGVRHIALQPRLFIGMILILIFAEVLGLYGLI 182
              :...|.....||:...|..|..|||         |:.:|:.:||...||....:|.:||:.|:
Human    78 AGAATVGVAGSGAGIGTVFGSLIIGYA---------RNPSLKQQLFSYAILGFALSEAMGLFCLM 133

  Fly   183 IGIYL 187
            :...:
Human   134 VAFLI 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-5NP_609447.1 ATP-synt_C 46..153 CDD:294318 25/99 (25%)
ATP-synt_C 127..187 CDD:278563 17/59 (29%)
ATP5MC3NP_001002258.1 ATP9 68..142 CDD:164765 20/80 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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