DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-5 and Vha16-1

DIOPT Version :9

Sequence 1:NP_609447.1 Gene:Vha16-5 / 34482 FlyBaseID:FBgn0032294 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_476801.1 Gene:Vha16-1 / 44307 FlyBaseID:FBgn0262736 Length:159 Species:Drosophila melanogaster


Alignment Length:149 Identity:106/149 - (71%)
Similarity:125/149 - (83%) Gaps:0/149 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PPYSPFYGVMGVVFSSVLTSAGAAYGTAVSGTGIAATAVMRPELVMKSIIPVVMAGIIAIYGLVV 105
            |.|.||:||||...:.:.::.|||||||.|||||||.:||||||:||||||||||||||||||||
  Fly    10 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVV 74

  Fly   106 SVLLSGELAPAPKYSLPTGYVHLAAGLSVGFAGLAAGYAVGEVGEVGVRHIALQPRLFIGMILIL 170
            :||::|.|....||||..|::||.|||:|||:|||||:|:|.||:.|||..|.|||||:||||||
  Fly    75 AVLIAGALEEPSKYSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILIL 139

  Fly   171 IFAEVLGLYGLIIGIYLYT 189
            ||||||||||||:.|||||
  Fly   140 IFAEVLGLYGLIVAIYLYT 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-5NP_609447.1 ATP-synt_C 46..153 CDD:294318 71/106 (67%)
ATP-synt_C 127..187 CDD:278563 45/59 (76%)
Vha16-1NP_476801.1 V_ATP_synt_C 15..122 CDD:130170 71/106 (67%)
ATP-synt_Vo_c_ATP6C_rpt2 90..157 CDD:349416 48/66 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444256
Domainoid 1 1.000 89 1.000 Domainoid score I2684
eggNOG 1 0.900 - - E1_COG0636
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I1314
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1534092at2759
OrthoFinder 1 1.000 - - FOG0001101
OrthoInspector 1 1.000 - - mtm8409
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10263
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X666
109.900

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