DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-5 and atp5mc3a

DIOPT Version :10

Sequence 1:NP_609447.1 Gene:Vha16-5 / 34482 FlyBaseID:FBgn0032294 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_957470.1 Gene:atp5mc3a / 394151 ZFINID:ZDB-GENE-040426-857 Length:139 Species:Danio rerio


Alignment Length:120 Identity:27/120 - (22%)
Similarity:51/120 - (42%) Gaps:15/120 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 IAATAVMRPELVMKSIIPVVMAGIIAIYGL--VVSVLLSGELAPAPKY----SLPTGYVHLAAGL 132
            ::|..:.|||...:.....::...:|...|  ..:..:|.::..|.|:    :...|.....||:
Zfish    25 VSAAVLSRPEAKPEVSTAAILQSPVAQMALRSFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGI 89

  Fly   133 SVGFAGLAAGYAVGEVGEVGVRHIALQPRLFIGMILILIFAEVLGLYGLIIGIYL 187
            ...|..|..|||         |:.:|:.:||...||....:|.:||:.|::...:
Zfish    90 GTVFGSLIIGYA---------RNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-5NP_609447.1 PRK13469 46..153 CDD:469780 17/84 (20%)
ATP-synt_Vo_c_ATP6C_rpt2 123..188 CDD:349416 18/65 (28%)
atp5mc3aNP_957470.1 ATP9 65..139 CDD:164765 20/80 (25%)

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