DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup107 and AT3G14120

DIOPT Version :9

Sequence 1:NP_609446.1 Gene:Nup107 / 34481 FlyBaseID:FBgn0027868 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_188028.2 Gene:AT3G14120 / 820629 AraportID:AT3G14120 Length:1101 Species:Arabidopsis thaliana


Alignment Length:910 Identity:186/910 - (20%)
Similarity:331/910 - (36%) Gaps:249/910 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EQNELSLMEDTGDDLDRGKSRMDVLFPQFFDVLQAQGNGQEAFEVIQS-------LTQVCRGVVE 98
            |...|...:...|:|.........||...||         .|.:.:.|       |.:.||.|.:
plant   111 ESQSLKACKIENDELAESGDTTFALFASLFD---------SALQGLMSIPNLMLRLEESCRNVSQ 166

  Fly    99 QLEL--EIDHGMGGEQGARQRESMLTWLRQEINTWRLLHALFYDRILLQTDRQADDEMQDGPTLG 161
            .:..  :|.|....::..||:..:|.   .|..:|.||..|:                      |
plant   167 SIRYGSDIRHRAVEDKLMRQKAQLLL---GEAASWSLLWNLY----------------------G 206

  Fly   162 GSEKEVIQQLYALNATLREYQLVVDWLEACYDRGEQQNPLHAHD-----RMMAWENTL----FQL 217
            ....||.:.|..:.:|        ..||||      |..|:.|.     |::.|...|    ..|
plant   207 KGTDEVPENLILIPST--------SHLEAC------QFVLNDHTAQLCLRIVMWLEELASKSLDL 257

  Fly   218 E-NLQGAAFG------------------KGHKIVT--RLDPDAPVREKRPLHALDEEDNLRLSRA 261
            | .:||:..|                  .|....|  .||.|||.||...|...|.:.:..:...
plant   258 ERKVQGSHVGTYLPNAGVWHHTQRYLKKNGSNADTLHHLDFDAPTREHARLLPDDYKQDESVLED 322

  Fly   262 IFELIRAGRVDDGLKLCKHFGQTWRAAIL---EGWRLHEDPNFE--------QNVSVLHEKLPIE 315
            ::.||||||:::...||:..||:||||.|   .|..:.  |:.|        :.:..:.::... 
plant   323 VWTLIRAGRIEEACDLCRSAGQSWRAATLCPFSGMDMF--PSIEALVKNGENRTLQAIEQESGF- 384

  Fly   316 GNPRRDIWKRCAWMLADSKNYDEYSRATAGVFSGHLGSLKTLLH--SNWHDLLWAHLKVQIDIRV 378
            ||..| :||..::..::.....:..:....||:....:|..:|.  ::|....||..|..:|::|
plant   385 GNQLR-LWKWASYCASEKIAEQDGGKHEVAVFATQCSNLNRMLPICTDWESACWAMAKSWLDVQV 448

  Fly   379 ESEI-----------RGC-----------CLKNYQPMPDDYWNGRMTMEQ------IFEELN--- 412
            :.|:           :.|           |..::.|   :.|...:..:|      :.::|:   
plant   449 DLELAQSKPGLTERFKSCIDESPEATQNGCQASFGP---EDWPLHVLNQQPRDLPALLQKLHSGE 510

  Fly   413 VAKDASVRDFAQSQLGIIQRHLILDTCGELIQHMVRWVEKDTSQQS-------PHQLRFMAHIVL 470
            :..:|.||. .:.|...||.:|:|.....|:..:..|:......||       ||.::|.||:||
plant   511 MVHEAVVRG-CKEQHRQIQMNLMLGDISHLLDIIWSWIAPLEDDQSNFRPHGDPHMIKFGAHMVL 574

  Fly   471 FLR-----QIGRVEQER---QAEKIVAAYVEALIARGEPQLIAYYTASLSNPLQVQLYSRFLE-- 525
            .||     :|....:|:   ..:.|:..|...|.::...:|:..|.:.|:....::|:...:|  
plant   575 VLRLLFTDEINDSFKEKLNNVGDLILHMYAMFLFSKQHEELVGIYASQLARHRCIELFVHMMELR 639

  Fly   526 ---QVEQKRPRELAVDAALQ-------AGLDVEQITRVTVQN--IRLA-HQPLGEFGEPQSGEIS 577
               .|..|....|:....|.       .|...|.:.||..::  |:|| :.|..:..|....:  
plant   640 MHSSVHVKYKIFLSAMEYLSFSPVDDLHGNFEEIVDRVLSRSREIKLAKYDPSIDVAEQHRQQ-- 702

  Fly   578 AIDQRKISALEWLIHLP--------EQRGEL----LWQANAMIRTY--LASSKVECMRQTFRMVP 628
              ..:|..|::||...|        :...:|    |..:|.:.|.:  :|..:|.........:.
plant   703 --SLQKAIAIQWLCFTPPSTIKDVKDVTSKLLLRSLMHSNILFREFALIAMWRVPATPVGAHTLL 765

  Fly   629 ADIVQQLVSLYGSVDNIPPREECCLKEYLCYKAYLSGVDSFVEWNRLQQNRPKKPQTSHAASSQD 693
            :.:.:.|..|..:.|.:.......|:|:..:..|.|....:..|.:.|....:            
plant   766 SYLAEPLKQLSENPDTLEDYVSENLQEFQDWNEYYSCDAKYRNWLKFQLENAE------------ 818

  Fly   694 NFTERMASERKEQAHRSEVVRWEHKVKEQAKQTIELLYNVLMFPDKGWLVDPFIAKLPENAVQLS 758
                  .:|..|:.::..||        .||:|::...::|:..|..|:.  |:    |:.|..|
plant   819 ------VTELSEEENQKAVV--------AAKETLDSSLSLLLRQDNPWMT--FL----EDHVFES 863

  Fly   759 WDHRLLQMEKLRSICIPEIALFLNEVMFKSGDFAGCVR------------LADEISSE---NRQL 808
            .::..|::.....:|:|            ||:   |:|            |...:|.|   :|||
plant   864 EEYLFLELHATAMLCLP------------SGE---CLRPDATVCAALMSALYSSVSEEVVLDRQL 913

  Fly   809  808
            plant   914  913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup107NP_609446.1 Nup84_Nup100 121..828 CDD:309305 168/821 (20%)
AT3G14120NP_188028.2 Nup84_Nup100 194..872 CDD:282039 155/757 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1964
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D671846at2759
OrthoFinder 1 1.000 - - FOG0005073
OrthoInspector 1 1.000 - - oto3867
orthoMCL 1 0.900 - - OOG6_103478
Panther 1 1.100 - - LDO PTHR13003
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4111
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.820

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