DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup107 and AT3G14120

DIOPT Version :10

Sequence 1:NP_609446.1 Gene:Nup107 / 34481 FlyBaseID:FBgn0027868 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_188028.2 Gene:AT3G14120 / 820629 AraportID:AT3G14120 Length:1101 Species:Arabidopsis thaliana


Alignment Length:909 Identity:189/909 - (20%)
Similarity:330/909 - (36%) Gaps:247/909 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EQNELSLMEDTGDDLDRGKSRMDVLFPQFFDVLQAQGNGQEAFEVIQS-------LTQVCRGVVE 98
            |...|...:...|:|.........||...||         .|.:.:.|       |.:.||.|.:
plant   111 ESQSLKACKIENDELAESGDTTFALFASLFD---------SALQGLMSIPNLMLRLEESCRNVSQ 166

  Fly    99 QLEL--EIDHGMGGEQGARQRESMLTWLRQEINTWRLLHALFYDRILLQTDRQADDEMQDGPTLG 161
            .:..  :|.|....::..||:..:|.   .|..:|.||..|:                      |
plant   167 SIRYGSDIRHRAVEDKLMRQKAQLLL---GEAASWSLLWNLY----------------------G 206

  Fly   162 GSEKEVIQQLYALNATLREYQLVVDWLEACYDRGEQQNPLHAHD-----RMMAWENTL----FQL 217
            ....||.:.|..:.:|        ..||||      |..|:.|.     |::.|...|    ..|
plant   207 KGTDEVPENLILIPST--------SHLEAC------QFVLNDHTAQLCLRIVMWLEELASKSLDL 257

  Fly   218 E-NLQGAAFG------------------KGHKIVT--RLDPDAPVREKRPLHALDEEDNLRLSRA 261
            | .:||:..|                  .|....|  .||.|||.||...|...|.:.:..:...
plant   258 ERKVQGSHVGTYLPNAGVWHHTQRYLKKNGSNADTLHHLDFDAPTREHARLLPDDYKQDESVLED 322

  Fly   262 IFELIRAGRVDDGLKLCKHFGQTWRAAIL---EGWRLHEDPNFEQNVSVLHEKL--PIE-----G 316
            ::.||||||:::...||:..||:||||.|   .|..:.  |:.|..|.....:.  .||     |
plant   323 VWTLIRAGRIEEACDLCRSAGQSWRAATLCPFSGMDMF--PSIEALVKNGENRTLQAIEQESGFG 385

  Fly   317 NPRRDIWKRCAWMLADSKNYDEYSRATAGVFSGHLGSLKTLLH--SNWHDLLWAHLKVQIDIRVE 379
            |..| :||..::..::.....:..:....||:....:|..:|.  ::|....||..|..:|::|:
plant   386 NQLR-LWKWASYCASEKIAEQDGGKHEVAVFATQCSNLNRMLPICTDWESACWAMAKSWLDVQVD 449

  Fly   380 SEI-----------RGC-----------CLKNYQPMPDDYWNGRMTMEQ------IFEELN---V 413
            .|:           :.|           |..::.|   :.|...:..:|      :.::|:   :
plant   450 LELAQSKPGLTERFKSCIDESPEATQNGCQASFGP---EDWPLHVLNQQPRDLPALLQKLHSGEM 511

  Fly   414 AKDASVRDFAQSQLGIIQRHLILDTCGELIQHMVRWVEKDTSQQS-------PHQLRFMAHIVLF 471
            ..:|.||. .:.|...||.:|:|.....|:..:..|:......||       ||.::|.||:||.
plant   512 VHEAVVRG-CKEQHRQIQMNLMLGDISHLLDIIWSWIAPLEDDQSNFRPHGDPHMIKFGAHMVLV 575

  Fly   472 LR-----QIGRVEQER---QAEKIVAAYVEALIARGEPQLIAYYTASLSNPLQVQLYSRFLE--- 525
            ||     :|....:|:   ..:.|:..|...|.::...:|:..|.:.|:....::|:...:|   
plant   576 LRLLFTDEINDSFKEKLNNVGDLILHMYAMFLFSKQHEELVGIYASQLARHRCIELFVHMMELRM 640

  Fly   526 --QVEQKRPRELAVDAALQ-------AGLDVEQITRVTVQN--IRLA-HQPLGEFGEPQSGEISA 578
              .|..|....|:....|.       .|...|.:.||..::  |:|| :.|..:..|....:   
plant   641 HSSVHVKYKIFLSAMEYLSFSPVDDLHGNFEEIVDRVLSRSREIKLAKYDPSIDVAEQHRQQ--- 702

  Fly   579 IDQRKISALEWLIHLP--------EQRGEL----LWQANAMIRTY--LASSKVECMRQTFRMVPA 629
             ..:|..|::||...|        :...:|    |..:|.:.|.:  :|..:|.........:.:
plant   703 -SLQKAIAIQWLCFTPPSTIKDVKDVTSKLLLRSLMHSNILFREFALIAMWRVPATPVGAHTLLS 766

  Fly   630 DIVQQLVSLYGSVDNIPPREECCLKEYLCYKAYLSGVDSFVEWNRLQQNRPKKPQTSHAASSQDN 694
            .:.:.|..|..:.|.:.......|:|:..:..|.|....:..|.:.|....:             
plant   767 YLAEPLKQLSENPDTLEDYVSENLQEFQDWNEYYSCDAKYRNWLKFQLENAE------------- 818

  Fly   695 FTERMASERKEQAHRSEVVRWEHKVKEQAKQTIELLYNVLMFPDKGWLVDPFIAKLPENAVQLSW 759
                 .:|..|:.::..||        .||:|::...::|:..|..|:.  |:    |:.|..|.
plant   819 -----VTELSEEENQKAVV--------AAKETLDSSLSLLLRQDNPWMT--FL----EDHVFESE 864

  Fly   760 DHRLLQMEKLRSICIPEIALFLNEVMFKSGDFAGCVR------------LADEISSE---NRQL 808
            ::..|::.....:|:|            ||:   |:|            |...:|.|   :|||
plant   865 EYLFLELHATAMLCLP------------SGE---CLRPDATVCAALMSALYSSVSEEVVLDRQL 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup107NP_609446.1 Nup84_Nup100 121..828 CDD:461184 171/820 (21%)
AT3G14120NP_188028.2 Nup84_Nup100 194..872 CDD:461184 158/756 (21%)

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