DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nup107 and nup107

DIOPT Version :9

Sequence 1:NP_609446.1 Gene:Nup107 / 34481 FlyBaseID:FBgn0027868 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001018780.2 Gene:nup107 / 3361255 PomBaseID:SPBC428.01c Length:813 Species:Schizosaccharomyces pombe


Alignment Length:886 Identity:211/886 - (23%)
Similarity:371/886 - (41%) Gaps:152/886 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FPRSSRSGLLRTTLNSSMPPQNLSHS---LLILEKSNAEQNELSLMEDTGDDLDRGKSRMDVLFP 67
            |....::.|...|||.....:|.|.|   |:.:::..||.|:                .:..:.|
pombe    17 FKTMHQNALNNATLNVLGHKKNGSSSIQELIEMDEEEAEMNQ----------------NVVCIGP 65

  Fly    68 QFFDVLQAQGNGQEAFEVIQSLT---------------QVCRGVVEQLELEIDHGMGGEQGARQR 117
            ....|....|:..|.|.:|.||.               ::|:...|:...|.|.           
pombe    66 NETAVSVELGDEYEKFNIITSLKKDNLFSKDGLLYAYYELCQEKFEKCLKEDDE----------- 119

  Fly   118 ESMLTWLR---QEINTWRLLHALFYDRILLQTDRQADDEMQDGPTLGGSEKEVI-QQLYALNATL 178
                .|:.   .|..||.|:..|:..|:   :::|...:..     ..|.:.|: ::.|:.|...
pombe   120 ----EWIELWDLESRTWDLIQRLYSFRL---SEQQGHIQSH-----AFSSRAVLEEEYYSQNPEA 172

  Fly   179 REYQLVVDWLEACYDRGEQQNPLHAHDRMMAWENTL--FQLENLQGAAFGK--GHKIVTRLDPDA 239
            .|..:|.:|.     |....:|.....|...|..|.  .:::|..|:.|..  ...||:.|||||
pombe   173 FENNIVFNWA-----RDNSSDPPSIEIRGNRWFYTREDIKMKNRGGSRFSSNISGTIVSNLDPDA 232

  Fly   240 PVREKRPLHALDEEDNLRLSRAIFELIRAGRVDDGLKLCKHFGQTWRAAILEGWRLHEDPNFEQN 304
            .:|:.:.|...|:....:.....|.|.|:|..::.|:||:..|..||:|.|:|...:.|      
pombe   233 DIRDDKRLDERDDNFERQFFHTAFCLFRSGSFEELLELCRRTGNHWRSASLQGILEYRD------ 291

  Fly   305 VSVLHEKLPIE--GNPRRDIWKRCAWMLADSKNYDEYSRATAGVFSGHLGSLKTLLHSNWHDLLW 367
             :::.:.|..|  ||.|:::.:|....|..:|..|.|.||..|...|.|.|:..:. :.|.|.:|
pombe   292 -NLIDDVLQSETSGNKRKELLRRSCLALTKNKRIDSYERALYGALCGDLNSVLDVC-TTWEDAMW 354

  Fly   368 AH----LKVQIDIRVESEIRGCCLKNYQPMPDDYWNGRMTMEQIFEELNVAKDASVRDFAQSQLG 428
            |:    .:..:|:.:.|:   ......|..|.|...| :|.|.||..|:.:..||:::.|...|.
pombe   355 AYYNSMTQYNLDVYLSSK---APQTETQLPPVDSGLG-LTPELIFNSLSNSSIASIQEEASHPLI 415

  Fly   429 IIQRHLILDTCGELIQ--HM-VRWVEKDTSQQS-----PHQLRFMAHIVLFLRQIGRVEQERQAE 485
            .:|.|:|.:...|::.  |: :..:....:.:|     |..||.:.||:|||:..|....|..::
pombe   416 KLQTHIICNKISEILSSAHIQLEAIRTGNAPESGDLVTPPLLRILTHIILFLKISGLAVDEYTSD 480

  Fly   486 KIVAAYVEALIARGEPQLIAYYTASLSNPLQVQLYSRFLEQVEQKRPRELAVDAALQAGLDV--- 547
            .|:.||:|.|.:..:..|:..|...|||.:|.:.|||||..|:::..|...:..|.:..||:   
pombe   481 SIIQAYIELLASAKKVNLVPLYIQYLSNQVQYEAYSRFLILVDEESARSEQLQLAKKYSLDINHA 545

  Fly   548 ---------EQITRVTVQNIRLAHQPLGEFGEPQSGEISAIDQRKISALEWLIHLPEQRGELLWQ 603
                     :::..|:.:.:...:  |....||    :....::.|..||||: :..|..|||..
pombe   546 ALLAVEYVYDEVVSVSPEEVHTVY--LKSIEEP----VEPSYKKLICTLEWLL-ITSQTDELLRF 603

  Fly   604 ANAMIRTYLASSKVECMRQTFRMVPADIVQQLVSLYGSVDNIPPREECCLKEYLCYKAYLSGVDS 668
            ||.:.|.:|:..::......:..:|:|.:..|.|..|..:|.....:.  .|.:.|:|....:..
pombe   604 ANLVYRFFLSIGELNSAYDLYTHIPSDALNTLSSSDGEPENDSKFRDA--YELMNYRALCRALKF 666

  Fly   669 FVEWNRLQQNRPKKPQTSHAASSQDNFTERMASERKEQAHRSEVVRWEHKVKEQAKQTIELLYNV 733
            :.||..|              |.|:.|.:...:    :|..|..| |:.|:...:::.::...::
pombe   667 YQEWEEL--------------SKQEVFEDSAVT----KASTSYKV-WKKKLNFASRKCVKSFTDL 712

  Fly   734 LMFPDKGWLVDPFIAKLPENAVQLSWDHRLL--QMEKLRSICIPEIALFLNEVMFKSGDFAGCVR 796
            |   ...||....:...|:       |..||  .:..:|::.:||:.|.|:.|.|...|:..|..
pombe   713 L---QANWLHPSTLELKPD-------DDPLLYKTLMTIRNLYVPELILGLHNVYFSLEDYDSCFA 767

  Fly   797 LADEISSENRQLYKVYTKH-KLAE---LLAKIADASLELLN 833
            ||:|::||:.:||....|. :|.|   .|.|..:.||...|
pombe   768 LANEVASEDLKLYHCLIKSGRLVEYVSYLGKAGECSLSTPN 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup107NP_609446.1 Nup84_Nup100 121..828 CDD:309305 184/746 (25%)
nup107NP_001018780.2 Nup84_Nup100 122..799 CDD:282039 182/739 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 183 1.000 Domainoid score I787
eggNOG 1 0.900 - - E1_KOG1964
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 184 1.000 Inparanoid score I1097
OMA 1 1.010 - - QHG56116
OrthoFinder 1 1.000 - - FOG0005073
OrthoInspector 1 1.000 - - oto100451
orthoMCL 1 0.900 - - OOG6_103478
Panther 1 1.100 - - LDO PTHR13003
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R849
SonicParanoid 1 1.000 - - X4111
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.