DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup107 and nup107

DIOPT Version :9

Sequence 1:NP_609446.1 Gene:Nup107 / 34481 FlyBaseID:FBgn0027868 Length:845 Species:Drosophila melanogaster
Sequence 2:XP_004912993.1 Gene:nup107 / 100492962 XenbaseID:XB-GENE-1006597 Length:952 Species:Xenopus tropicalis


Alignment Length:900 Identity:295/900 - (32%)
Similarity:470/900 - (52%) Gaps:81/900 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADSPFPRSSRSGLLR-----TTLNSSMPPQ------NLSHSLLILEKSNAEQNELSLMEDTGDDL 55
            |..|..|::...|.|     .|.|||.||.      .:..|..:::......| :|:|.:..|.:
 Frog    74 ARGPLSRTTGQTLFRQHMTPQTWNSSRPPDVSAILGTVGRSPRLVQTPGRLAN-MSMMSNPDDSV 137

  Fly    56 -----DRGKSRMDVLF--PQFFD-------VLQAQGNGQEA--------------------FEVI 86
                 ..|::.|....  |.|.:       :||.:..|:.|                    ||:|
 Frog   138 WTTTFSPGRTGMYTTLDSPSFTEDITLSAVMLQEEDPGEAATMSMYPDFLKSFLEHPSSAVFELI 202

  Fly    87 QSLTQVCRGVVEQLELEIDHGMGGEQGARQRESMLTWLRQEINTWRLLHALFYDRILLQTDRQAD 151
            :.....|...:..|:..:.....|:|...:..|:|..|:||:.||||:.||:.|||....:   :
 Frog   203 EHYEATCNTQITLLKKIVKRVTPGQQKFSKTASILWLLQQEMVTWRLIAALYRDRIQFALE---E 264

  Fly   152 DEMQDGPTLGGSEKEVIQQLYALNATLREYQLVVDWLE--ACYDRGEQQNPLHAHDRMMAWENTL 214
            :.|.:......|||.|:.:|:..:|.:|:.||||||||  |..:.|:..:.:..:.:.:.|||||
 Frog   265 ENMFEIAAPNASEKTVVDKLFQRDALVRQSQLVVDWLESIAKDEVGDFSDNIEYYAKSVYWENTL 329

  Fly   215 FQLENLQGAAFGKGHKIVTRLDPDAPVREKRPLHALDEEDNLRLSRAIFELIRAGRVDDGLKLCK 279
            ..|:....::.|.|..:|:.||||||:|:|.||..||.||::||.:.:|.|||||..|:..:|||
 Frog   330 HTLKQRSMSSLGSGRPLVSELDPDAPIRQKLPLDDLDREDDIRLLKYLFTLIRAGMTDEAQRLCK 394

  Fly   280 HFGQTWRAAILEGWRLHEDPNFEQNVSVLHEKLPIEGNPRRDIWKRCAWMLADSKNYDEYSRATA 344
            ..||.||||.||||:|:.|.|.....    |...:||||.|.:||.|.|.:|:.:.:.:|.||..
 Frog   395 RCGQAWRAATLEGWKLYHDANINGGT----ELQAVEGNPYRCVWKTCCWRMAEDEQFSKYERAIY 455

  Fly   345 GVFSGHLGSLKTLLHSNWHDLLWAHLKVQIDIRVESEIRG--CCLKNYQPMPDDYWNGRMTMEQI 407
            ...||:|..|..:..| |.|.:|||.||.:|..||.|||.  ..:.....:|.:|.....|:|::
 Frog   456 ATLSGNLKQLLPVCES-WEDTVWAHFKVMVDSLVEQEIRASVISINEANELPREYLEANWTLERV 519

  Fly   408 FEELNVAKDASVRDFAQSQLGIIQRHLILDTCGELIQHMVRWVEKDTSQQSPHQLRFMAHIVLFL 472
            ||||.......|.:..:....|||:.:||.....|:.....|:..:......|.||||.|::||.
 Frog   520 FEELQATDKRRVLEENREHYHIIQKFVILADVDGLMDEFSEWLANEKKLLLGHLLRFMTHLILFF 584

  Fly   473 RQIGRVEQERQAEKIVAAYVEALIARGEPQLIAYYTASLSNPLQVQLYSRFLEQVEQKRPRELAV 537
            |.:|...:|..:.:::..|::.||...:.:|||:|.:.|...|.:..|:.|||.|.....|:..:
 Frog   585 RTLGLQTKEEVSVEVLKTYIQRLINEKQIELIAFYVSHLPQDLAISQYAVFLENVTDPEQRQRCL 649

  Fly   538 DAALQAGLDVEQITRVTVQNIRLAHQPLGEFGEP------QSGEISAIDQRKISALEWLIHLPEQ 596
            :.|.:|||||..||:..|:|.|  .:..|||...      .|| .|..|:.||:.::||:..|.|
 Frog   650 ELAKEAGLDVASITKTVVENTR--KKDAGEFAHHNLAPALDSG-TSEEDRAKINVIDWLVFDPAQ 711

  Fly   597 RGELLWQANAMIRTYLASSKVECMRQTFRMVPADIVQQLVSLY--GSVDN-IPPREECCLKEYLC 658
            |.|.|.|:||::|.:|||.|.|..::.|..:|.|.:.::.:.:  .::|: :|..::..::|:||
 Frog   712 RAEALKQSNAIMRKFLASKKHEAAKEVFAKIPQDSIAEIYTQWEEQAMDSALPAEDDNAIREHLC 776

  Fly   659 YKAYLSGVDSFVEWNRLQQNRPKKPQTSHAASSQDNFTERMASERKEQAHRSEVVRWEHKVKEQA 723
            .:|||...::|.||.:...:.|:||    ....|.:|||::|.|.||:.:..:...|:..:....
 Frog   777 IRAYLEAHEAFNEWFKHINSPPQKP----TLVGQASFTEKVAYEHKEKKYEMDFGIWKGHLDALT 837

  Fly   724 KQTIELLYNVLMFPDKGWLVDPFIAKLPENAVQLSWDHRLLQMEKLRSICIPEIALFLNEVMFKS 788
            .:..|.:||||:|.|.||:||  :.:..|...:.|  |   ||..||::|:|.:...|:.|:..:
 Frog   838 TEVKEKIYNVLLFVDGGWMVD--VREDTEEDPERS--H---QMNLLRTLCLPMMCFLLHTVLHNT 895

  Fly   789 GDFAGCVRLADEISSENRQLYKVYTKHKLAELLAKIADASLELLNSKLDPWGYPI 843
            ..:..|:||||.||||:::||.|::|.::..||.|:.::||.||:.:|||.||.|
 Frog   896 KQYKDCLRLADIISSEHQKLYMVFSKTEMRNLLQKLRESSLMLLDQQLDPLGYEI 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup107NP_609446.1 Nup84_Nup100 121..828 CDD:309305 253/719 (35%)
nup107XP_004912993.1 Nup84_Nup100 237..935 CDD:282039 253/719 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 440 1.000 Domainoid score I540
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5555
Inparanoid 1 1.050 470 1.000 Inparanoid score I1482
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D277935at33208
OrthoFinder 1 1.000 - - FOG0005073
OrthoInspector 1 1.000 - - otm47482
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R849
SonicParanoid 1 1.000 - - X4111
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.090

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