DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC3 and EMC3

DIOPT Version :9

Sequence 1:NP_609444.1 Gene:EMC3 / 34479 FlyBaseID:FBgn0032292 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_012715.3 Gene:EMC3 / 853628 SGDID:S000001690 Length:253 Species:Saccharomyces cerevisiae


Alignment Length:258 Identity:83/258 - (32%)
Similarity:130/258 - (50%) Gaps:33/258 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLIDPDIRVWVFLPIVLITFLVGIVRHYVSILIS------TQKKAEITQIQDSQAMIRARLLREN 62
            :|:|..::.||.|||.::..|.|:::.|:..||:      .|.:.::|:.|..|   .|:||..|
Yeast     1 MLLDDQLKYWVLLPISIVMVLTGVLKQYIMTLITGSSANEAQPRVKLTEWQYLQ---WAQLLIGN 62

  Fly    63 GKYLSAQSFSMRKNYF---NNEETGYFKTQKR-------APVAQNSSAM---LTDMVKGNFINVL 114
            |..||:.:|:.:|.:.   ..||....|.:::       .|...|..:|   :.:|.|||..:.:
Yeast    63 GGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQDGSQAGEVPNPFNDPSMSNAMMNMAKGNMASFI 127

  Fly   115 PMVVIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGVELASLDAAWVSSASWYFLNVFGLRSIYT 179
            |..:|..|:|..|:||:..::|||||.:||.|||.|:....||..||||.||||::|.||..:|.
Yeast   128 PQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYN 192

  Fly   180 LVLGENNHADQTQAQADAMTGAAMTMPQDP-----KAAFKAEWEALEITEYHNALKNIDADML 237
            |: |.|:.....||......|     ||.|     ..|..|....|.|.::...|.|::..:|
Yeast   193 LI-GLNDQDMGIQAGIGGPQG-----PQGPPQSQVDKAMHAMANDLTIIQHETCLDNVEQRVL 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC3NP_609444.1 DUF106 3..185 CDD:396507 69/199 (35%)
EMC3NP_012715.3 DUF106 2..194 CDD:396507 72/210 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346264
Domainoid 1 1.000 121 1.000 Domainoid score I1251
eggNOG 1 0.900 - - E1_KOG3188
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10201
Inparanoid 1 1.050 126 1.000 Inparanoid score I1276
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53712
OrthoFinder 1 1.000 - - FOG0003058
OrthoInspector 1 1.000 - - oto99813
orthoMCL 1 0.900 - - OOG6_102473
Panther 1 1.100 - - LDO PTHR13116
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1973
SonicParanoid 1 1.000 - - X2419
TreeFam 00.000 Not matched by this tool.
1413.830

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