DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC3 and AT4G12590

DIOPT Version :9

Sequence 1:NP_609444.1 Gene:EMC3 / 34479 FlyBaseID:FBgn0032292 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_192996.1 Gene:AT4G12590 / 826872 AraportID:AT4G12590 Length:246 Species:Arabidopsis thaliana


Alignment Length:238 Identity:90/238 - (37%)
Similarity:141/238 - (59%) Gaps:14/238 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDSQAMIRARLLRENGKYLS 67
            :|::|..||.||.:|:.::..|:||:|::||.|:.:....:...:::.|.:||||.|:....::.
plant     4 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNLKVGANFIP 68

  Fly    68 AQSFSMRKNYFNNEETGYFKTQKRAPVAQNSSA-------MLTDMVKGNFINVLPMVVIGGWINW 125
            .:||..|:.||:|||.|.....|..  |||..|       |..||:|.|...::|..:...|:|:
plant    69 PKSFRARRFYFSNEENGLLHVPKGE--AQNPQAAMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNF 131

  Fly   126 MFSGFVTTKVPFPLTLRFKPMLQRGVELASLDAAWVSSASWYFLNVFGLRSIYTLVLGENNHADQ 190
            .|||||..|:|||||.||:.|||.|::|:::|.::|||.||||||:||||.:::|:||:.|..|.
plant   132 FFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGDENAIDD 196

  Fly   191 TQAQADAMTGAAMTMPQDPKAAFKAEWEALEITEYHNALKNID 233
            ||.... |.|...    |...:..||.:.|:|.::..||...:
plant   197 TQRMMQ-MGGFGF----DASKSLGAEKDGLDIIQHEWALPRFE 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC3NP_609444.1 DUF106 3..185 CDD:396507 77/188 (41%)
AT4G12590NP_192996.1 DUF106 4..191 CDD:396507 77/188 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 164 1.000 Domainoid score I1233
eggNOG 1 0.900 - - E1_KOG3188
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I1541
OMA 1 1.010 - - QHG53712
OrthoDB 1 1.010 - - D1482782at2759
OrthoFinder 1 1.000 - - FOG0003058
OrthoInspector 1 1.000 - - oto2947
orthoMCL 1 0.900 - - OOG6_102473
Panther 1 1.100 - - LDO PTHR13116
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2419
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.880

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