DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC3 and Emc3

DIOPT Version :9

Sequence 1:NP_609444.1 Gene:EMC3 / 34479 FlyBaseID:FBgn0032292 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001008356.1 Gene:Emc3 / 312640 RGDID:1311566 Length:261 Species:Rattus norvegicus


Alignment Length:239 Identity:151/239 - (63%)
Similarity:188/239 - (78%) Gaps:3/239 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDSQAMIRARLLRENGKYLS 67
            |||:|.:||:||.||||:|||.||::|||||||:.:.||....|:.|||.:||:|:|||||||:.
  Rat     5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIP 69

  Fly    68 AQSFSMRKNYFNNEETGYFKTQKR---APVAQNSSAMLTDMVKGNFINVLPMVVIGGWINWMFSG 129
            .|||..||.||||.|.|:||..||   .|.......|||||:|||..|||||::||||||..|||
  Rat    70 KQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSG 134

  Fly   130 FVTTKVPFPLTLRFKPMLQRGVELASLDAAWVSSASWYFLNVFGLRSIYTLVLGENNHADQTQAQ 194
            |||||||||||||||||||:|:||.:|||:|||||||||||||||||||:|:||::|.|||::..
  Rat   135 FVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMM 199

  Fly   195 ADAMTGAAMTMPQDPKAAFKAEWEALEITEYHNALKNIDADMLA 238
            .:.||||||.||.|...|||.||||||:|::..||.:::.:::|
  Rat   200 QEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELMA 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC3NP_609444.1 DUF106 3..185 CDD:396507 125/184 (68%)
Emc3NP_001008356.1 DUF106 5..190 CDD:396507 125/184 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353217
Domainoid 1 1.000 262 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG3188
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 314 1.000 Inparanoid score I2494
OMA 1 1.010 - - QHG53712
OrthoDB 1 1.010 - - D1482782at2759
OrthoFinder 1 1.000 - - FOG0003058
OrthoInspector 1 1.000 - - oto97529
orthoMCL 1 0.900 - - OOG6_102473
Panther 1 1.100 - - O PTHR13116
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2419
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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