DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17118 and Cfap20

DIOPT Version :10

Sequence 1:NP_723611.1 Gene:CG17118 / 34478 FlyBaseID:FBgn0032291 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_038953624.1 Gene:Cfap20 / 307642 RGDID:1308493 Length:197 Species:Rattus norvegicus


Alignment Length:183 Identity:113/183 - (61%)
Similarity:148/183 - (80%) Gaps:0/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYRAAYQKGFLTVLYSVGSSPLNNWSSYTKNGYIKRIYDEDIKSLVLEIMGSNVSTTFIHCPSEC 65
            |::..:|.|||::|||:||.||..|....:||:||||.|.||:||||||.|:|||||:|.||::.
  Rat     1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADP 65

  Fly    66 KEQLGIKLPFLVLLIKNMHKYFCFEVKIQDDQRFMRRFRVSNFQSKTSVKPFCTAMPMGMSPGWN 130
            |:.|||||||||::|||:.|||.|||::.||:...||||.||:||.|.||||...|||.:..|||
  Rat    66 KKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWN 130

  Fly   131 QIQFNLADFTRRAYGSNYLETVSLQLHANVRIRRIYFADKLYTEAELPNDYRL 183
            ||||||:||||||||:||:||:.:|:|||.||||:||:|:||:|.|||.:::|
  Rat   131 QIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17118NP_723611.1 CFA20_dom 1..184 CDD:461521 113/183 (62%)
PHA03247 <193..279 CDD:223021
Cfap20XP_038953624.1 CFA20_dom 1..185 CDD:461521 113/183 (62%)
Blue background indicates that the domain is not in the aligned region.

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