DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17118 and wdr90

DIOPT Version :9

Sequence 1:NP_723611.1 Gene:CG17118 / 34478 FlyBaseID:FBgn0032291 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_003201394.2 Gene:wdr90 / 100038787 ZFINID:ZDB-GENE-070424-67 Length:1843 Species:Danio rerio


Alignment Length:349 Identity:68/349 - (19%)
Similarity:131/349 - (37%) Gaps:84/349 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RAAYQKGFLTVLYSVGSSPLNNWSSYTKNGYIKRIYDEDIKSLVLEIMGSNVSTTFIHCPSECKE 67
            :|.:|:.::.:...:   .:..|...:|.|.:....|:::|..|..|.||..::.:|..|....:
Zfish     4 KALWQQPYVNIFKHM---KIEEWKKVSKEGDVSLYMDKNLKCSVFSIRGSIQASNYILLPKTSSQ 65

  Fly    68 QLGIKLPFLVLLIK-NMHKYFCFEVKIQDDQRFMRRFRVSN----FQSKTSVKPF---CTAM--- 121
            .||:...:|.||.| :.:|:|...:.|..::..:.|...||    |:|..:...|   |.|.   
Zfish    66 TLGLTGRYLYLLFKPSPNKHFIVHLDIAAEEGQVIRVSFSNLFKEFKSTATWLQFPFLCGAAHGS 130

  Fly   122 ---------------PMGMSPGWN----QIQFNLADFTRRAYGSNYLETVSLQLHANVRIRRIYF 167
                           |...|..|.    .:::.|:.:..|.:  ::|:  |::|.||:.::.|..
Zfish   131 VDENTSTTAKQGLVGPAPWSTRWTCLTMDLRYVLSVYLNRTH--SHLK--SIKLCANMSVKNIIT 191

  Fly   168 ADKLYT------------------EAELPND--------------YRLMGKPKDLKKPEKQFKVQ 200
            :|.|:.                  .|.:|.:              |..:..|.|..|....|..:
Zfish   192 SDLLFDPGLSFSEFRQSGVMLPDGSAPMPREMCFPVPKGQSWHHLYDYIRFPSDGIKSPIDFIQK 256

  Fly   201 ATARPPSPLNTGRGEPGPSKDTDAEATGPATDPMS------EPEPALQKSPS----PPVPQKVPS 255
            |:.......:..:..|...:......:.|..|.:|      :|:....|..|    |.:|:.:.|
Zfish   257 ASNSAAKKASAEKESPQREESRMVRISKPVNDRVSLVKQITKPKRRSTKQCSEIQTPSLPKLIYS 321

  Fly   256 PA-ASAPPEPATEEPAPQTEATEE 278
            |: .|..|    ..|..:::|.||
Zfish   322 PSRVSESP----GSPGQRSQAGEE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17118NP_723611.1 DUF667 1..184 CDD:398611 46/242 (19%)
PHA03247 <193..279 CDD:223021 19/97 (20%)
wdr90XP_003201394.2 DUF667 7..197 CDD:282825 42/196 (21%)
WD40 302..790 CDD:225201 12/44 (27%)
WD40 <450..689 CDD:295369
WD40 repeat 457..495 CDD:293791
WD40 repeat 502..536 CDD:293791
WD40 repeat 552..594 CDD:293791
WD40 670..1000 CDD:295369
WD40 repeat 670..701 CDD:293791
WD40 repeat 707..742 CDD:293791
WD40 repeat 746..784 CDD:293791
WD40 repeat 792..827 CDD:293791
WD40 818..1330 CDD:225201
WD40 repeat 833..869 CDD:293791
WD40 repeat 933..969 CDD:293791
WD40 965..1314 CDD:295369
WD40 repeat 976..1013 CDD:293791
WD40 repeat 1211..1245 CDD:293791
WD40 <1214..1574 CDD:225201
WD40 1241..1557 CDD:295369
WD40 repeat 1251..1292 CDD:293791
WD40 repeat 1297..1365 CDD:293791
WD40 repeat 1392..1426 CDD:293791
WD40 repeat 1480..1528 CDD:293791
WD40 1491..1790 CDD:295369
WD40 1519..>1841 CDD:225201
WD40 repeat 1533..1569 CDD:293791
WD40 repeat 1576..1619 CDD:293791
WD40 repeat 1625..1661 CDD:293791
WD40 repeat 1668..1717 CDD:293791
WD40 repeat 1777..1809 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3213
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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