DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6443 and Rtf2

DIOPT Version :10

Sequence 1:NP_609443.1 Gene:CG6443 / 34477 FlyBaseID:FBgn0032290 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_079818.1 Gene:Rtf2 / 66404 MGIID:1913654 Length:307 Species:Mus musculus


Alignment Length:314 Identity:128/314 - (40%)
Similarity:188/314 - (59%) Gaps:26/314 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCDGGTIPRRDELVRVKQKPEQKDKDAEREFRWRHCTLTQQSLQEPIAMCGMGRLYSKQSVIER 65
            |||||||||:|.|||:..:|.|:.|||||...:|.:|||:|:.|:.||..|.:||||:|.:|||.
Mouse     1 MGCDGGTIPKRHELVKGPKKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEF 65

  Fly    66 LLEK---EPMPETAAHVKSMKDIRQLNPTPNPAF------TEEDKTEGLLDTRHSPYICKLIGLE 121
            ||:|   :.:.:.|:|::|:|::.:|..:.|||:      |:.||.:   |.:.:.:||.::|||
Mouse    66 LLDKSAEKALGKAASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHD---DLQRARFICPVVGLE 127

  Fly   122 MSGKFRFVALWSCGCVLSERALKQIKGSVASTCPLCQAAYSVEDVVVLNGNEEDMELMRVKMEMR 186
            |:|:.||..|..||||.||||||:||   |..|..|.||:..||::||||.:||:|:::.:||.|
Mouse   128 MNGRHRFCFLRCCGCVFSERALKEIK---AEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEER 189

  Fly   187 AAKRKSSKKDKKSAKKVEVKAEPAEEQEPVA-STSKAAAAEKPTTSTKTKAVAPVKRLGAVNA-- 248
            ..:.|..||.||.....|..::|...|:... |..|:...|:.....:.|...|..|..|.|.  
Mouse   190 RLRAKLEKKTKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKSTPAPRGAATNGSA 254

  Fly   249 ---MQDPELKRLKSDFSVAKDPKASDVYKSLFTSHKTEK--DQERAHWVTYNPF 297
               :..|....||.  |:| |.:.|:.|||:||||.:.|  .:|.|||||:..:
Mouse   255 SGKVGKPPCGALKR--SIA-DSEESETYKSIFTSHSSAKRSKEESAHWVTHTSY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6443NP_609443.1 Rtf2 1..284 CDD:398360 121/297 (41%)
Rtf2NP_079818.1 Rtf2 1..290 CDD:398360 121/297 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..296 31/105 (30%)

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