DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6443 and Rtf2

DIOPT Version :9

Sequence 1:NP_609443.1 Gene:CG6443 / 34477 FlyBaseID:FBgn0032290 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_079818.1 Gene:Rtf2 / 66404 MGIID:1913654 Length:307 Species:Mus musculus


Alignment Length:314 Identity:128/314 - (40%)
Similarity:188/314 - (59%) Gaps:26/314 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCDGGTIPRRDELVRVKQKPEQKDKDAEREFRWRHCTLTQQSLQEPIAMCGMGRLYSKQSVIER 65
            |||||||||:|.|||:..:|.|:.|||||...:|.:|||:|:.|:.||..|.:||||:|.:|||.
Mouse     1 MGCDGGTIPKRHELVKGPKKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEF 65

  Fly    66 LLEK---EPMPETAAHVKSMKDIRQLNPTPNPAF------TEEDKTEGLLDTRHSPYICKLIGLE 121
            ||:|   :.:.:.|:|::|:|::.:|..:.|||:      |:.||.:   |.:.:.:||.::|||
Mouse    66 LLDKSAEKALGKAASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHD---DLQRARFICPVVGLE 127

  Fly   122 MSGKFRFVALWSCGCVLSERALKQIKGSVASTCPLCQAAYSVEDVVVLNGNEEDMELMRVKMEMR 186
            |:|:.||..|..||||.||||||:||   |..|..|.||:..||::||||.:||:|:::.:||.|
Mouse   128 MNGRHRFCFLRCCGCVFSERALKEIK---AEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEER 189

  Fly   187 AAKRKSSKKDKKSAKKVEVKAEPAEEQEPVA-STSKAAAAEKPTTSTKTKAVAPVKRLGAVNA-- 248
            ..:.|..||.||.....|..::|...|:... |..|:...|:.....:.|...|..|..|.|.  
Mouse   190 RLRAKLEKKTKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKSTPAPRGAATNGSA 254

  Fly   249 ---MQDPELKRLKSDFSVAKDPKASDVYKSLFTSHKTEK--DQERAHWVTYNPF 297
               :..|....||.  |:| |.:.|:.|||:||||.:.|  .:|.|||||:..:
Mouse   255 SGKVGKPPCGALKR--SIA-DSEESETYKSIFTSHSSAKRSKEESAHWVTHTSY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6443NP_609443.1 Rtf2 1..284 CDD:282492 121/297 (41%)
Rtf2NP_079818.1 Rtf2 1..290 CDD:282492 121/297 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..296 31/105 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842440
Domainoid 1 1.000 210 1.000 Domainoid score I2832
eggNOG 1 0.900 - - E1_KOG3113
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9501
Inparanoid 1 1.050 221 1.000 Inparanoid score I3545
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54954
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004247
OrthoInspector 1 1.000 - - oto95172
orthoMCL 1 0.900 - - OOG6_102106
Panther 1 1.100 - - LDO PTHR12775
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1705
SonicParanoid 1 1.000 - - X4050
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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