DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6443 and rtf2

DIOPT Version :9

Sequence 1:NP_609443.1 Gene:CG6443 / 34477 FlyBaseID:FBgn0032290 Length:299 Species:Drosophila melanogaster
Sequence 2:XP_012827074.1 Gene:rtf2 / 407963 XenbaseID:XB-GENE-5854991 Length:304 Species:Xenopus tropicalis


Alignment Length:316 Identity:129/316 - (40%)
Similarity:191/316 - (60%) Gaps:31/316 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCDGGTIPRRDELVRVKQKPEQKDKDAEREFRWRHCTLTQQSLQEPIAMCGMGRLYSKQSVIER 65
            |||||||||:|.|||:..:|.|:.||:||...||.:|.|:|:.|.:||..|.:||||:|.:|||.
 Frog     1 MGCDGGTIPKRHELVKGPKKVEKIDKNAELVARWYYCMLSQERLTKPIVACELGRLYNKDAVIEF 65

  Fly    66 LLEK---EPMPETAAHVKSMKDIRQLNPTPNPAF------TEEDKTEGLLDTRHSPYICKLIGLE 121
            ||:|   :|..:||||:|.:|.|.:||.:.|||:      |:.||    .|.:.:.:||.::|||
 Frog    66 LLDKSPDKPHADTAAHIKGIKSIIELNLSDNPAWAGGKGNTKGDK----YDEQCAQFICPVVGLE 126

  Fly   122 MSGKFRFVALWSCGCVLSERALKQIKGSVASTCPLCQAAYSVEDVVVLNGNEEDMELMRVKMEMR 186
            |:|:.||..|.:||||.||||||:||..|   |..|.|.:...|:::|||::|::|.:|.:||.|
 Frog   127 MNGRHRFCVLRNCGCVFSERALKEIKTDV---CHKCGAGFKETDIILLNGDKEEVEELRKRMEER 188

  Fly   187 AAKRKSSKKDKKSAKKVEVKAEPAEEQEPVASTSKAAAAEKPTTSTKTKA--VAPVKRLGAVNAM 249
            ..|.||.||.|| .|.||..::|.:.:|...|:.|.|   :.|:..:.|.  |:..|.  .|::.
 Frog   189 RLKAKSEKKAKK-PKAVESVSKPDQGEESPGSSQKEA---EDTSFPRDKIDFVSTAKT--QVDSQ 247

  Fly   250 QDPELKRLKSDFSVAKDP-----KASDVYKSLFTSHKTEK--DQERAHWVTYNPFY 298
            ........||..|..|.|     :.|:.|||:||||.:.|  .::.::|:|:..:|
 Frog   248 SSSSDAAAKSSSSCTKRPAPGSERKSEAYKSIFTSHNSAKRTKEQSSNWITHTAYY 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6443NP_609443.1 Rtf2 1..284 CDD:282492 125/298 (42%)
rtf2XP_012827074.1 Rtf2 1..287 CDD:368033 125/298 (42%)
RING-like Rtf2 domain (C2HC2-type) 120..159 CDD:319567 23/41 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 205 1.000 Domainoid score I2865
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9501
Inparanoid 1 1.050 213 1.000 Inparanoid score I3550
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1385322at2759
OrthoFinder 1 1.000 - - FOG0004247
OrthoInspector 1 1.000 - - oto105354
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1705
SonicParanoid 1 1.000 - - X4050
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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