DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6431 and Lpl

DIOPT Version :10

Sequence 1:NP_001188790.1 Gene:CG6431 / 34476 FlyBaseID:FBgn0032289 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_032535.2 Gene:Lpl / 16956 MGIID:96820 Length:474 Species:Mus musculus


Alignment Length:249 Identity:75/249 - (30%)
Similarity:107/249 - (42%) Gaps:44/249 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 FSKHRETVFIIHGFNGTAI-DIHLQFLRDAYLSR--DFNVITVDW--RPLTRYPCYLHSLINTRL 149
            |:...:|..:|||:..|.: :..:..|..|...|  |.|||.|||  |....||.   |...|:|
Mouse    69 FNHSSKTFVVIHGWTVTGMYESWVPKLVAALYKREPDSNVIVVDWLYRAQQHYPV---SAGYTKL 130

  Fly   150 TAQCTAQIYAFL-THYGAVRERITCVGHSLGAHICGMISNHLTRKQYRIIGLDPARPLIERMKSN 213
            .....|:...:: ..:....:.:..:|:|||||..|:..:...:|..||.|||||.|..|..::.
Mouse   131 VGNDVARFINWMEEEFNYPLDNVHLLGYSLGAHAAGVAGSLTNKKVNRITGLDPAGPNFEYAEAP 195

  Fly   214 KFRLSIDDANVIQVLHT----NAG-FLGQEDNSGHLNYCVNGGRIQPFCK-GNPIR--------- 263
            . |||.|||:.:.||||    :.| .:|.:...||::...|||..||.|. |..||         
Mouse   196 S-RLSPDDADFVDVLHTFTRGSPGRSIGIQKPVGHVDIYPNGGTFQPGCNIGEAIRVIAERGLGD 259

  Fly   264 ---KSRCSHFLSI---------------CYLATATFKHNKFMGVPC-PNGCLNL 298
               ..:|||..||               .|...:.....|.:.:.| .|.|.||
Mouse   260 VDQLVKCSHERSIHLFIDSLLNEENPSKAYRCNSKEAFEKGLCLSCRKNRCNNL 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6431NP_001188790.1 alpha/beta hydrolases 63..293 CDD:473884 71/242 (29%)
LplNP_032535.2 Interaction with GPIHBP1. /evidence=ECO:0000250|UniProtKB:P06858 32..53
lipo_lipase 33..472 CDD:132274 75/249 (30%)
Essential for determining substrate specificity. /evidence=ECO:0000250|UniProtKB:P06858 243..266 4/22 (18%)
Important for interaction with lipoprotein particles. /evidence=ECO:0000250|UniProtKB:P06858 417..421
Important for heparin binding. /evidence=ECO:0000250|UniProtKB:P06858 430..434
Interaction with GPIHBP1. /evidence=ECO:0000250|UniProtKB:P06858 443..467
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.