DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6415 and Amt

DIOPT Version :9

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001013836.1 Gene:Amt / 434437 MGIID:3646700 Length:403 Species:Mus musculus


Alignment Length:398 Identity:205/398 - (51%)
Similarity:266/398 - (66%) Gaps:9/398 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSYRLPA-ALGGLRHASSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQ 67
            |.:||.| .|...|..||.....:||.|||||:..|||:|.|.|::|||||.| |.:.||||||:
Mouse    11 LGFRLQAQPLVQSRPLSSVQDVLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHVDSHLHTRR 74

  Fly    68 VGSIFDVSHMLQSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKE 132
            ..|:||||||||::|||.|....||||...||.......|:|::||||||||||||||:..||..
Mouse    75 HCSLFDVSHMLQTKIFGCDRVKLLESVVVGDIAELRPNQGTLSLFTNEAGGILDDLIVSNTSEGH 139

  Fly   133 LYVVSNAAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASL 197
            |||||||..:::|:.:|:..|..|:::|.||.:|.:   :.:|:|:|||...:.|...:|.  .:
Mouse   140 LYVVSNAGCRDKDLALMQDKVKEFQNRGLDVGLEVV---ENALLALQGPTATQVLQAGVTD--DM 199

  Fly   198 DQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGARDSL 262
            .:|.||:|.|..:.|:...|:|||||||||||||||.::.|..|..:||::..:|||||.|||||
Mouse   200 KKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPATGAVHLATTLLKNPEVKLAGLAARDSL 264

  Fly   263 RLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTK 327
            ||||||||||:|||..|||||.:|:|.:.||||...|||||.:|:.|||..|.||||||...|. 
Mouse   265 RLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGA- 328

  Fly   328 PPPARSGVAIFSQGQQVGQVTSGCPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKM 392
            |..|.|.: :.::|..:|.|||||||||..:|:|||||......|||::..:||.|.....|:||
Mouse   329 PVRAHSPI-LNTEGTVIGTVTSGCPSPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKM 392

  Fly   393 PFVKANYY 400
            |||..|||
Mouse   393 PFVPTNYY 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 PLN02319 3..403 CDD:177953 205/398 (52%)
GCV_T 31..288 CDD:279857 137/256 (54%)
GCV_T_C 298..392 CDD:285832 44/93 (47%)
AmtNP_001013836.1 PLN02319 16..400 CDD:177953 200/391 (51%)
GCV_T 39..291 CDD:279857 137/257 (53%)
GCV_T_C 301..392 CDD:285832 44/92 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839992
Domainoid 1 1.000 262 1.000 Domainoid score I1938
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H409
Inparanoid 1 1.050 361 1.000 Inparanoid score I2188
Isobase 1 0.950 - 0 Normalized mean entropy S939
OMA 1 1.010 - - QHG53675
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004170
OrthoInspector 1 1.000 - - oto95123
orthoMCL 1 0.900 - - OOG6_101103
Panther 1 1.100 - - LDO PTHR43757
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R483
SonicParanoid 1 1.000 - - X2922
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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