DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6415 and CG3270

DIOPT Version :9

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_610228.1 Gene:CG3270 / 35575 FlyBaseID:FBgn0033093 Length:440 Species:Drosophila melanogaster


Alignment Length:396 Identity:72/396 - (18%)
Similarity:133/396 - (33%) Gaps:119/396 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALGGLRHASSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVS 75
            ::||:|...|.| |....:|:.::....|: .:.|...|..|.:...|:||......:.....:.
  Fly    80 SVGGVRQQFSLA-ENIEMSLFGYNFVVNGR-EHLGDVDLCYQPNGYLILASEKGAHILAKNSKLQ 142

  Fly    76 HMLQSR--IFGKDA---------AACLESVC--------------------TADILGTPEGSGSL 109
            :.|.:|  :.|.:|         ...:|..|                    .|..||....:||:
  Fly   143 NELGARNELLGPEALRQRFPWLSTEGVELGCHGIDKEGWFDPWALLMGYKKKARALGANFANGSV 207

  Fly   110 TVFT-NEAGGILDDL-----IVNKVSEKELYVVSNAAMKEQDMGIMKTAVDNFKSQGKDVSIEFL 168
            ..|. |::||:...:     ::.:..:.:..|::..|...|   :.:.|....| :.|:.|:...
  Fly   208 VGFEWNDSGGLSGAVVDAGDVLQRTVKFDTCVLAAGAYSGQ---VARLAGIGDK-EAKEASLSVA 268

  Fly   169 TPADQS-----LVAVQG---PQVAKELS---------------KLLTGKA------------SLD 198
            .|.:..     :|:.||   |.:|..|:               ..|.|::            .:|
  Fly   269 LPVEPRKRYVYVVSTQGKNCPGLATPLTVDPDGTYFRRDGLCGNFLCGRSPNEDEEPECETLDVD 333

  Fly   199 QLYFMSSFVTTLAG-IPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGAR--- 259
            ..||.:....|||. :|...            .:.:.||.|     ...:.......|:..|   
  Fly   334 HGYFETDVWPTLANRVPAFE------------SVKIQSSWA-----GFYDHNTFDANGVIGRHPH 381

  Fly   260 -DSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADVILGQLKEGVSRRRVGLQM 323
             .:|.:.||...:|.   .:|..|..|::.|:...:.||.|.                .|:|.:.
  Fly   382 YSNLFIAAGFSGHGI---QQTPAVGRAISELILDGKFTTLDL----------------SRLGFER 427

  Fly   324 LGTKPP 329
            |..:.|
  Fly   428 LVNQQP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 PLN02319 3..403 CDD:177953 72/396 (18%)
GCV_T 31..288 CDD:279857 57/333 (17%)
GCV_T_C 298..392 CDD:285832 5/32 (16%)
CG3270NP_610228.1 DadA 54..432 CDD:223737 71/393 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456409
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.