DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6415 and Pdpr

DIOPT Version :9

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_938050.1 Gene:Pdpr / 319518 MGIID:2442188 Length:878 Species:Mus musculus


Alignment Length:429 Identity:95/429 - (22%)
Similarity:170/429 - (39%) Gaps:77/429 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GEGQRTA-LYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHMLQSRIFGK- 85
            |...||: |||....:|.:.:...|:..|..:              |....|:..:.||:.|.| 
Mouse   453 GRQLRTSPLYDRLDAQGARWMEKHGFERPKYF--------------VPPNKDLLALEQSKTFYKP 503

  Fly    86 --------DAAACLESVCTADI--------------------------LGTPEGSGSLTVFTNEA 116
                    :...|.|:||..|:                          |..|.|....|...||.
Mouse   504 DWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDEALESLQYLFCNDLDVPVGHIVHTGMLNEY 568

  Fly   117 GGILDDLIVNKVSEKELYVVSNAAMKEQDMGIMKTA-VDNFKSQGKDVSIEFLTPADQSLVAVQG 180
            ||..:|..:.:::::..:::|     ..|..:...| ::.:..:..::.:|.:|....:|..: |
Mouse   569 GGYENDCSIARLTKRSFFMIS-----PTDQQVHCWAWLNKYLPKDSNLLLEDVTWKYTALNLI-G 627

  Fly   181 PQVAKELSKLLTGKASLDQLYFMSSFVTTLA-GIPN-VRITRCGYTGEDGVEISVASSQAQKLTE 243
            |:....||:|.....:.|  :|.:.|...:: |..| :|:....:|||.|..:.:....|..:..
Mouse   628 PRAVDVLSELSYAPMTPD--HFPTLFCKEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYN 690

  Fly   244 SLLESGV---LKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADV 305
            .::..|.   ::.||..|..|||:|.....:|.|:::.|||:|......|...:..  ||.|.|.
Mouse   691 EVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGGESRVKLEKGI--DFIGRDA 753

  Fly   306 ILGQLKEGVSRRRVGLQMLGTKPPPARS----GVAIFSQGQQVGQVTSGCPSPSAGRNIAMGYVA 366
            :|.|.:.|| .:|:.:.:|.........    |..|:..|:..|:.||...|.:..|::.:||| 
Mouse   754 LLQQKQTGV-YKRLAMFILDDHDTDLDLWPWWGEPIYRNGKYAGKTTSSAYSYTLERHVCLGYV- 816

  Fly   367 ENLKAPGTKVEFKVRDKL----YEAEVTKMPF-VKANYY 400
            .|......:.:....|.:    ||.::....| .||..|
Mouse   817 HNFSEDSGEEQVVTTDFINRGEYEIDIAGHRFQAKAKLY 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 PLN02319 3..403 CDD:177953 95/429 (22%)
GCV_T 31..288 CDD:279857 61/297 (21%)
GCV_T_C 298..392 CDD:285832 25/101 (25%)
PdprNP_938050.1 DadA 38..425 CDD:223737
GcvT 452..867 CDD:223481 95/429 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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