DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6415 and Pdpr

DIOPT Version :10

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001100900.1 Gene:Pdpr / 307852 RGDID:1308307 Length:878 Species:Rattus norvegicus


Alignment Length:431 Identity:97/431 - (22%)
Similarity:169/431 - (39%) Gaps:81/431 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GEGQRTA-LYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHMLQSRIFGK- 85
            |...||: |||....:|.:.:...|:..|..:              |....|:..:.||:.|.| 
  Rat   453 GRQLRTSPLYDRLDAQGARWMEKHGFERPKYF--------------VPPNKDLLALEQSKTFYKP 503

  Fly    86 --------DAAACLESVCTADI--------------------------LGTPEGSGSLTVFTNEA 116
                    :...|.|:||..|:                          |..|.|....|...||.
  Rat   504 DWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALESLQYLFSNDLDVPVGHIVHTGMLNEY 568

  Fly   117 GGILDDLIVNKVSEKELYVVSNAAMKEQDMGIMKTA-VDNFKSQGKDVSIEFLTPADQSLVAVQG 180
            ||..:|..:.:::::..:::|     ..|..:...| :..:..:..::.:|.:|....:|..: |
  Rat   569 GGHENDCSIARLTKRSFFMIS-----PTDQQVHCWAWLHKYLPKDSNLLLEDVTWKYTALNLI-G 627

  Fly   181 PQVAKELSKLLTGKASLDQLYFMSSFVTTLA-GIPN-VRITRCGYTGEDGVEISVASSQAQKLTE 243
            |:....||:|.....:.|  :|.:.|...:: |..| :|:....:|||.|..:.:....|..:..
  Rat   628 PRAVDVLSELSYAPMTPD--HFPTLFCKEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYN 690

  Fly   244 SLLESGV---LKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADV 305
            .::..|.   ::.||..|..|||:|.....:|.|:::.|||:|......|...:..  ||.|.|.
  Rat   691 EVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGGESRVKLEKGI--DFIGRDA 753

  Fly   306 ILGQLKEGVSRRRVGLQM------LGTKPPPARSGVAIFSQGQQVGQVTSGCPSPSAGRNIAMGY 364
            :|.|.:.||.:|.|...:      |...|   ..|..|:..|:..|:.||...|.:..|::.:||
  Rat   754 LLQQKQTGVYKRLVMFILDDHDTDLDLWP---WWGEPIYRNGKYAGKTTSSAYSYTLERHVCLGY 815

  Fly   365 VAENLKAPGTKVEFKVRDKL----YEAEVTKMPF-VKANYY 400
            | .|......:.:....|.:    ||.::....| .||..|
  Rat   816 V-HNFSEDSGEEQVVTADFINRGEYEIDIAGHRFQAKAKLY 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 gcvT 3..403 CDD:476863 97/431 (23%)
PdprNP_001100900.1 DadA 40..384 CDD:440429
FAO_M 405..459 CDD:465100 2/5 (40%)
GcvT 453..867 CDD:440173 97/431 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.