DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6415 and Amt

DIOPT Version :9

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_038937253.1 Gene:Amt / 306586 RGDID:1359408 Length:408 Species:Rattus norvegicus


Alignment Length:375 Identity:196/375 - (52%)
Similarity:257/375 - (68%) Gaps:8/375 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVSHMLQSRIFGKDAAAC 90
            :||.|||||:..|||:|.|.|::|||||.| |.:.||||||:..|:||||||||::|||.|....
  Rat    39 RRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHVDSHLHTRRHCSLFDVSHMLQTKIFGCDRVRL 102

  Fly    91 LESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAAMKEQDMGIMKTAVDN 155
            :|::...||.......|:|::||||||||||||||...||..|||||||..:::|:.:|:..|..
  Rat   103 MENIVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCRDKDLALMQDKVKE 167

  Fly   156 FKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLDQLYFMSSFVTTLAGIPNVRITR 220
            |:::|.||.:|.:   |.:|:|:|||..|:.|...:|.  .:.:|.||:|.|..:.|:...|:||
  Rat   168 FQNRGLDVGLEVV---DNALLALQGPTAAQVLQAGVTD--DMRKLPFMTSAVMEVFGVSGCRVTR 227

  Fly   221 CGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAA 285
            |||||||||||||.::.|..|..:||::..:|||||.|||||||||||||||:|||..|||||.:
  Rat   228 CGYTGEDGVEISVPAAGAVHLATALLKNPEVKLAGLAARDSLRLEAGLCLYGNDIDEHTTPVEGS 292

  Fly   286 LAWLVTKRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIFSQGQQVGQVTSG 350
            |:|.:.||||...|||||.:|:.|||..|.||||||...|. |..|.|.: :.::|..:|.||||
  Rat   293 LSWTLGKRRRVAMDFPGAKIIIPQLKGEVQRRRVGLICEGA-PMRAHSPI-LNTEGAVIGTVTSG 355

  Fly   351 CPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKANYY 400
            |||||..:|:||||||.....|||::..:||.|.....|:|||||...||
  Rat   356 CPSPSLKKNVAMGYVAFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTKYY 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 PLN02319 3..403 CDD:177953 196/375 (52%)
GCV_T 31..288 CDD:279857 136/256 (53%)
GCV_T_C 298..392 CDD:285832 45/93 (48%)
AmtXP_038937253.1 GCV_T 16..405 CDD:423040 194/373 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 210 1.000 Domainoid score I2733
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H409
Inparanoid 1 1.050 309 1.000 Inparanoid score I2535
OMA 1 1.010 - - QHG53675
OrthoDB 1 1.010 - - D306101at33208
OrthoFinder 1 1.000 - - FOG0004170
OrthoInspector 1 1.000 - - oto98616
orthoMCL 1 0.900 - - OOG6_101103
Panther 1 1.100 - - LDO PTHR43757
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2922
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.980

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