DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6415 and AMT

DIOPT Version :9

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_000472.2 Gene:AMT / 275 HGNCID:473 Length:403 Species:Homo sapiens


Alignment Length:401 Identity:211/401 - (52%)
Similarity:263/401 - (65%) Gaps:13/401 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLSYRLPAALGGLRHASSAAGEG-QRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTR 66
            ||.:||.|....|....|.|.|. :||.|||||:..|||:|.|.|::|||||.| |...||||||
Human    10 RLGFRLQAFPPALCRPLSCAQEVLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRD-SHTDSHLHTR 73

  Fly    67 QVGSIFDVSHMLQSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEK 131
            |..|:||||||||::|.|.|....:||:...||.......|:|::||||||||||||||...||.
Human    74 QHCSLFDVSHMLQTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEG 138

  Fly   132 ELYVVSNAAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKA- 195
            .|||||||...|:|:.:|:..|...::||:||.:|.|   |.:|:|:|||..|:.|.   .|.| 
Human   139 HLYVVSNAGCWEKDLALMQDKVRELQNQGRDVGLEVL---DNALLALQGPTAAQVLQ---AGVAD 197

  Fly   196 SLDQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGARD 260
            .|.:|.||:|.|..:.|:...|:|||||||||||||||..:.|..|..::|::..:|||||.|||
Human   198 DLRKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARD 262

  Fly   261 SLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLG 325
            ||||||||||||:|||..|||||.:|:|.:.||||...|||||.||:.|||..|.||||||...|
Human   263 SLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEG 327

  Fly   326 TKPPPARSGVAIFS-QGQQVGQVTSGCPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEV 389
            .   |.|:...|.: :|.::|.|||||||||..:|:|||||......|||.:..:||.|...|.|
Human   328 A---PMRAHSPILNMEGTKIGTVTSGCPSPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVV 389

  Fly   390 TKMPFVKANYY 400
            :|||||..|||
Human   390 SKMPFVPTNYY 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 PLN02319 3..403 CDD:177953 211/401 (53%)
GCV_T 31..288 CDD:279857 140/257 (54%)
GCV_T_C 298..392 CDD:285832 46/94 (49%)
AMTNP_000472.2 PLN02319 16..400 CDD:177953 205/393 (52%)
GCV_T 39..291 CDD:279857 140/258 (54%)
GCV_T_C 301..392 CDD:285832 46/93 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149951
Domainoid 1 1.000 258 1.000 Domainoid score I2009
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H409
Inparanoid 1 1.050 362 1.000 Inparanoid score I2191
Isobase 1 0.950 - 0 Normalized mean entropy S939
OMA 1 1.010 - - QHG53675
OrthoDB 1 1.010 - - D306101at33208
OrthoFinder 1 1.000 - - FOG0004170
OrthoInspector 1 1.000 - - oto91542
orthoMCL 1 0.900 - - OOG6_101103
Panther 1 1.100 - - LDO PTHR43757
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R483
SonicParanoid 1 1.000 - - X2922
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

Return to query results.
Submit another query.