DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6415 and gcv1

DIOPT Version :9

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_594015.1 Gene:gcv1 / 2543195 PomBaseID:SPAC31G5.14 Length:387 Species:Schizosaccharomyces pombe


Alignment Length:393 Identity:173/393 - (44%)
Similarity:243/393 - (61%) Gaps:13/393 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AALGGLRHASSAAGEG--QRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIF 72
            |||..|:..||.|...  :||.|||.|:::|..||.|.|:::||||..|:|.|||..||:...:|
pombe     5 AALSILKRQSSTAASSSLKRTPLYDLHLKEGATIVPFAGFSMPVQYKGQTISASHKWTREHSGLF 69

  Fly    73 DVSHMLQSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVS 137
            |||||:|..:.|::|.|.|||:..:.:........:|:.||||.|||:||.|::|..|...|:|:
pombe    70 DVSHMVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENTYYIVT 134

  Fly   138 NAAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKASLDQLYF 202
            |||..|:|...:|..::|:|      .:|......::|:|:|||:.|..:.||:. ......|.|
pombe   135 NAACSEKDEANLKKHIENWK------GVELERVQGRALIAIQGPETASVVQKLIP-NVDFSVLKF 192

  Fly   203 MSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGVLKLAGLGARDSLRLEAG 267
            ..|......|: ....:|.|||||||.|:|:....:.....:||....::..||||||:||||||
pombe   193 GQSAYVDFKGV-KCLFSRSGYTGEDGFEVSIPEEVSVDFASTLLADTRVRPIGLGARDTLRLEAG 256

  Fly   268 LCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPAR 332
            :||||||||..|:|||.:|:|::.||||....|.|:..||.:||:|.||||||..:   :..|||
pombe   257 MCLYGSDIDDTTSPVEGSLSWIIGKRRRKEGGFVGSSRILKELKDGPSRRRVGFIV---EKVPAR 318

  Fly   333 SGVAIFSQGQQVGQVTSGCPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVKA 397
            .|.|:...|.:|||||||||||:.|:||||||::..|...||....|||:||:.|:|.:||||:.
pombe   319 HGSAVEVDGVEVGQVTSGCPSPTLGKNIAMGYISTGLHQVGTPAHIKVRNKLHPAQVVRMPFVET 383

  Fly   398 NYY 400
            :||
pombe   384 HYY 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 PLN02319 3..403 CDD:177953 173/393 (44%)
GCV_T 31..288 CDD:279857 105/256 (41%)
GCV_T_C 298..392 CDD:285832 47/93 (51%)
gcv1NP_594015.1 PLN02319 17..387 CDD:177953 167/381 (44%)
GCV_T 28..277 CDD:279857 105/256 (41%)
GCV_T_C 287..378 CDD:285832 47/93 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 201 1.000 Domainoid score I655
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H409
Inparanoid 1 1.050 315 1.000 Inparanoid score I561
OMA 1 1.010 - - QHG53675
OrthoFinder 1 1.000 - - FOG0004170
OrthoInspector 1 1.000 - - oto102040
orthoMCL 1 0.900 - - OOG6_101103
Panther 1 1.100 - - LDO PTHR43757
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R483
SonicParanoid 1 1.000 - - X2922
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.