DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6415 and Dmgdh

DIOPT Version :9

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_038957650.1 Gene:Dmgdh / 245961 RGDID:620453 Length:884 Species:Rattus norvegicus


Alignment Length:336 Identity:92/336 - (27%)
Similarity:162/336 - (48%) Gaps:20/336 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RQVGSIFDVSHMLQSRIFGKDAAACLESVCTADILGTPE-GSGSLTVFTNEAGGILDDLIVNKVS 129
            ::|| :.|:|...:..|.|:|:...|:.:| |:::  |: |..:::......|.:..:|.|:..|
  Rat   547 QRVG-VIDLSPFGKFNIKGQDSTQLLDHLC-ANVI--PKVGFTNISHMLTPRGRVYAELTVSHQS 607

  Fly   130 EKELYVVSNAAMKEQDM-GIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTG 193
            ..|..:::.:..:..|: .|.:.||..    |.||.|..:|. :..::.|.||...:.|.||.:.
  Rat   608 PGEFLLITGSGSELHDLRWIEEAAVRG----GYDVEIRNITD-ELGVLGVAGPYARRVLQKLTSE 667

  Fly   194 KASLDQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESGV---LKLAG 255
            ..|.|...|:.:....::.|| |...|..||||.|.|:......:..|.|.::.:|.   :...|
  Rat   668 DLSDDVFKFLQTKSLKISDIP-VTAIRISYTGELGWELYHRREDSAALYERIMNAGQEEGIDNFG 731

  Fly   256 LGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADVILGQLK-EGVSRRRV 319
            ..|.::||||.....:||:::..|.|:||.|.:.:  :.....:|.|... |.|:| :|:.||.|
  Rat   732 TYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFI--KLNKPANFTGKQA-LKQIKAKGLKRRLV 793

  Fly   320 GLQMLGTKPPPARSGVAIFSQGQQVGQVTSGCPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKL 384
            .| .|.|.........:::.:|:.:|..|||..|.|..:::|..||...|...|.:||.::..|.
  Rat   794 CL-TLATDNVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSLAFAYVPVELSEVGQQVEVELLGKN 857

  Fly   385 YEAEVTKMPFV 395
            |.|.:.:.|.|
  Rat   858 YPATIIQEPLV 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 PLN02319 3..403 CDD:177953 92/336 (27%)
GCV_T 31..288 CDD:279857 61/226 (27%)
GCV_T_C 298..392 CDD:285832 29/94 (31%)
DmgdhXP_038957650.1 DadA 67..455 CDD:223737
FAO_M 437..492 CDD:406692
GcvT 508..877 CDD:223481 92/336 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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