DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6415 and pdpr-1

DIOPT Version :9

Sequence 1:NP_609441.1 Gene:CG6415 / 34474 FlyBaseID:FBgn0032287 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_492730.2 Gene:pdpr-1 / 172922 WormBaseID:WBGene00013718 Length:855 Species:Caenorhabditis elegans


Alignment Length:347 Identity:99/347 - (28%)
Similarity:163/347 - (46%) Gaps:42/347 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RQVGSIFDVSHMLQSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSE 130
            |:...:.|:|...:..|.|:||...|:.:|:|:: ..|.|:...|...::.||.:.|..::::.|
 Worm   507 RERVGLMDMSSFSKYDITGEDAVEYLQFLCSANV-DEPIGTTVYTGMQHQKGGYVTDCTLSRLGE 570

  Fly   131 KELYVVSNAAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKA 195
            |:.::|:....:|:.:..||......|::   |.::.:|.|..:|..: ||. ::.|...:||.:
 Worm   571 KKFFMVAPTIQQERVLVWMKKWQAILKAR---VHVQDVTGAYTALDLI-GPS-SRYLMGDITGLS 630

  Fly   196 SLDQLYFMSS--FVT---------TLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLESG 249
                   |||  |.|         ...||..:.:|.|   ||.|..|.|.:..||.:.|.:|::|
 Worm   631 -------MSSNDFPTFRCQEINIGMATGIRAISVTHC---GELGWVIYVPNEVAQNVYEKILDAG 685

  Fly   250 ---VLKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADVILGQLK 311
               .|:.||......||:|.....:|.||::..||||....:.|..:    :||.|...:..|::
 Worm   686 KEYSLQHAGYYTLRQLRIEKFYVYWGQDINATVTPVECGRLFRVDFK----KDFIGKKALEEQVE 746

  Fly   312 EGVSRRRVGLQMLG----TKPPPARSGVAIFSQGQQVGQVTSGCPSPSAGRNIAMGYVAENLKAP 372
            .|||:|.|.|.:.|    |.|.| :.|..|...|:.||..||.....:.|..:.:||| || |..
 Worm   747 RGVSKRFVQLLVDGHDKETDPWP-QGGETILKDGRAVGLTTSAAYGFTLGCQVCIGYV-EN-KEF 808

  Fly   373 GTKVEFKVRDKLYEAEVTKMPF 394
            |...|| |....:|.::....|
 Worm   809 GVSPEF-VSSGHFEIDIAGKRF 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6415NP_609441.1 PLN02319 3..403 CDD:177953 99/347 (29%)
GCV_T 31..288 CDD:279857 64/235 (27%)
GCV_T_C 298..392 CDD:285832 33/97 (34%)
pdpr-1NP_492730.2 DAO 23..387 CDD:279590
NAD_binding_8 28..>54 CDD:290186
FAO_M 394..445 CDD:292961
GcvT 439..833 CDD:223481 99/347 (29%)
GCV_T 449..724 CDD:279857 64/232 (28%)
GCV_T_C 733..833 CDD:285832 34/101 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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