DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SAMD7 and Samd7

DIOPT Version :9

Sequence 1:NP_001291295.1 Gene:SAMD7 / 344658 HGNCID:25394 Length:446 Species:Homo sapiens
Sequence 2:NP_083765.2 Gene:Samd7 / 75953 MGIID:1923203 Length:445 Species:Mus musculus


Alignment Length:448 Identity:293/448 - (65%)
Similarity:334/448 - (74%) Gaps:10/448 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAVNPLLTPTGQQTIPLIPSPFGPPTVDRDVLPSTVAPTDPRQFCVPSQFGSSVLPNTNMANVLS 65
            |:|:.||| :|||.:|::|||||||.||||||.|::|||||.|||||||||||.|||.||.|.||
Mouse     6 MSVSSLLT-SGQQKVPMVPSPFGPPIVDRDVLSSSIAPTDPSQFCVPSQFGSSGLPNANMPNPLS 69

Human    66 SRIYPGWGILPPESIKAVARRNEMIQRHHTARTEMEMYAIYQQRRMEKINPKGLAGLGIPFLYGS 130
            |..|.||||||||.||||..||||.:|||.||.|||||::|||||||::|||||:|||||..|||
Mouse    70 SHFYSGWGILPPEPIKAVTTRNEMFERHHAARAEMEMYSLYQQRRMERVNPKGLSGLGIPLFYGS 134

Human   131 SVPAAPAAYHGRSMLPAGDLHFHRSTLRNLQGNPMLAATAPHFEESWGQRCRRLRKNTGNQKALD 195
            |....|..:.|||.|||.|:|.||||.|:|||||:|.||.|||.|.|||: .|||:....||..:
Mouse   135 SCLGGPTGFQGRSTLPASDVHLHRSTFRHLQGNPILLATRPHFTECWGQK-YRLRRGAVYQKPPE 198

Human   196 SDAESSKSQAEEKILGQTHAVPYEEDHYAKDPDIEAPSNQKSSETNEKPTTALANTCGELEPTHR 260
            ||.||.|||||||...|...:.|||:.|.||||||..:.||....:.||||..||..|||....|
Mouse   199 SDTESFKSQAEEKSSSQMPTLSYEEEEYIKDPDIEVDNQQKPRVADGKPTTVPANPHGELHTHQR 263

Human   261 KPWGSHTTTLKAKAWDDGKEEASEQIFATCDEKNGVCPPVPRPSLPGTHALVTIGGNLSLDEDIQ 325
            ||     ::|:|.||||||.:.|||::..||.||||..||....|.|||..|.:..|.|| .|||
Mouse   264 KP-----SSLEANAWDDGKGKPSEQVYEGCDGKNGVFRPVSILPLSGTHEQVALRENCSL-SDIQ 322

Human   326 KWTVDDVHSFIRSLPGCSDYAQVFKDHAIDGETLPLLTEEHLRGTMGLKLGPALKIQSQVSQHVG 390
            |||||||::||||||||||||||||||||||||||||||:|||||||||||||||||||||||||
Mouse   323 KWTVDDVYNFIRSLPGCSDYAQVFKDHAIDGETLPLLTEQHLRGTMGLKLGPALKIQSQVSQHVG 387

Human   391 SMFYKKTLSFP--IRQAFDQPADTSPLLDPNSWSDTMNIFCPQDTIIPKGIERGSMRN 446
            :||.||..|.|  .|||||||||||||||.:||||.::|..|||.:.||..|:..|||
Mouse   388 NMFCKKLPSLPTHARQAFDQPADTSPLLDMSSWSDGLSIPGPQDLLSPKRTEQDVMRN 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SAMD7NP_001291295.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..207 10/19 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 225..277 24/51 (47%)
SAM_Samd7,11 324..391 CDD:188978 63/66 (95%)
Samd7NP_083765.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..282 46/93 (49%)
SAM_Samd7,11 321..388 CDD:188978 63/66 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..445 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83966395
Domainoid 1 1.000 381 1.000 Domainoid score I12083
eggNOG 1 0.900 - - E1_KOG3829
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H18802
Inparanoid 1 1.050 569 1.000 Inparanoid score I11072
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG40594
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012422
OrthoInspector 1 1.000 - - oto123188
orthoMCL 1 0.900 - - OOG6_120216
Panther 1 1.100 - - LDO PTHR12247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11891
SonicParanoid 1 1.000 - - X10393
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1717.290

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