DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31871 and Lipm

DIOPT Version :10

Sequence 1:NP_723607.1 Gene:CG31871 / 34463 FlyBaseID:FBgn0051871 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001419222.1 Gene:Lipm / 309528 RGDID:1304912 Length:422 Species:Rattus norvegicus


Alignment Length:398 Identity:144/398 - (36%)
Similarity:233/398 - (58%) Gaps:18/398 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LLNSVLLSSNPNLAGGGRNLKSDVLEDASLITPKLIRKYGYPSETHTVVTKDGYILEMHRIP--- 109
            :|.:.||..|.| :|......:|  .:|.:...::|:..|||||.:.|.|:|||||.::|||   
  Rat    21 ILVAYLLQRNVN-SGHMPTKAAD--PEAFMNVSEIIKHKGYPSEEYEVATEDGYILSVNRIPRGQ 82

  Fly   110 ----KKGAQP-VLLMHGILDTSATWVLMGPKSGLGYMLSDLGYDVWMGNSRGNRYSKNHTSLNSD 169
                |:|::| |||.||:|..::.|:...|.:.||::|:|.|:||||||||||.:|:.|.:|:.|
  Rat    83 TQLKKEGSRPVVLLQHGLLGDASNWISNLPNNSLGFILADAGFDVWMGNSRGNTWSRKHKTLSID 147

  Fly   170 YQEFWDFTFHEMGKYDLPANIDYILSKTGYEQVHYIGHSQGTAIFWVLCSEQPAYTQKITSMHAL 234
            ..|||.|::.||.::||||.|::||.|||.::::|:|:||||.:.::..|..|....||....||
  Rat   148 QDEFWAFSYDEMARFDLPAVINFILQKTGQKKIYYVGYSQGTTMGFIAFSTMPELAHKIKMYFAL 212

  Fly   235 APIAYIHDMKSPLFRTLVLFLDFLTAATRMLRITEFMPNTKFLVDHSQVVCHDNAMTQDVCSNIL 299
            ||||.:...|||..:.|:| .|.:...  :....||:..|:|.......:|....:.| :||||:
  Rat   213 APIATVKHAKSPGTKFLLL-PDMMIKG--LFGRQEFLYQTRFFRQLFIYLCGQMILDQ-ICSNII 273

  Fly   300 FLVAGYNSEQLNKTMLPVMLSHTPSGASIKQLEHFGQLMKSGHFRKFDRG-YLRNQLEYNRMTPP 363
            .|:.|:|:..:|.:...|.::|||:|.|::.:.|:.|.:.||..|.||.| ..:|:.:.|:.||.
  Rat   274 LLLGGFNTNNMNMSRANVYVAHTPAGTSVQNILHWSQAVNSGELRAFDWGSETKNREKSNQPTPI 338

  Fly   364 DYDLSRVKVPVALYYSVNDLLVSTTGVDRLARELPNVIDKYLVPMERFNHLDFLWAIDVKPLVYN 428
            .|.:..:.||.|::....|.|.:...|..|..|:.|:|....:|  .:.|:||:|.:|....|||
  Rat   339 RYKVRDMMVPTAMWTGGQDWLSNPDDVKTLLSEVTNLIYHKNIP--EWAHVDFIWGLDAPHRVYN 401

  Fly   429 RLVRNVRR 436
            .::..:::
  Rat   402 EIIHLMKQ 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31871NP_723607.1 PLN02872 81..435 CDD:215470 136/362 (38%)
LipmNP_001419222.1 PLN02872 50..408 CDD:215470 136/363 (37%)

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